Radish Marker Database

B. rapa genome (v1.2) list : A08

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1553 A08 7544527 1e-101
RSS2501 A08 7572530 9e-71
RSS3597 A08 7572530 6e-61
RSS1725 A08 7573764 5e-97
RSS0923 A08 7584338 5e-90 LG9 16.4
RSS2377 A08 7693444 1e-112
RSS0008 A08 7712349 4e-39 LG4 75.7
RSS1890 A08 7939719 2e-36
RSS3808 A08 7997996 1e-124
RSS1745 A08 8054391 1e-112
RSS2785 A08 8070985 2e-48
RSS0729 A08 8244919 4e-64
RSS0015 A08 8491961 2e-72 LG7 79.3
RSS1747 A08 8589837 1e-13 LG7 58.6
RSS3229 A08 8596433 8e-89
RSS3374 A08 8723218 2e-67
RSS0427 A08 8739371 4e-81
RSS2930 A08 8857865 3e-89
RSS1420 A08 8870434 3e-62
RSS1040 A08 8924382 3e-76
RSS0483 A08 9489510 4e-15
RSS0765 A08 9837439 1e-121
RSS2649 A08 10011720 4e-85
RSS4001 A08 10397812 1e-117
RSS2640 A08 10398739 1e-69
RSS2658 A08 10435814 4e-28
RSS3727 A08 10544693 1e-67
RSS3070 A08 10812844 1e-56
RSS0826 A08 10871236 1e-70
RSS0364 A08 11119710 3e-98
RSS0378 A08 11164947 1e-125
RSS2380 A08 11221663 3e-21
RSS3787 A08 11235897 1e-136
RSS0911 A08 11251481 3e-21
RSS1184 A08 11356738 7e-53
RSS0856 A08 11438052 9e-07
RSS0145 A08 11500179 2e-77
RSS2364 A08 11509516 2e-39
RSS2829 A08 11685844 6e-28
RSS0641 A08 11787577 1e-143
RSS1869 A08 11788180 1e-134
RSS1635 A08 11859186 3e-72 LG5 38.2
RSS2615 A08 11946973 7e-19
RSS1563 A08 12002921 1e-123
RSS1330 A08 12132910 1e-89 LG7 59.5
RSS3533 A08 12297702 6e-73
RSS3629 A08 12306855 1e-104
RSS1680 A08 12517460 1e-113 LG7 55.8
RSS1687 A08 12520149 2e-33
RSS3976 A08 12540243 3e-40
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282

MarkerDB | Raphanus sativus