Radish Marker Database

B. rapa genome (v1.2) list : A07

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 362


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3729 A07 18781501 2e-10 LG1 17.8
RSS2871 A07 11591761 1e-14 LG1 20.8
RSS1721 A07 11723044 2e-07 LG1 21.2
RSS0830 A07 11739908 3e-86 LG1 21.2
RSS3893 A07 12411377 1e-129 LG1 22.6
RSS0476 A07 12478172 3e-46 LG1 23.1
RSS0148 A07 13344172 2e-83 LG1 29.9
RSS0466 A07 13793419 1e-108 LG1 31.2
RSS0449 A07 13810392 3e-47 LG1 31.3
RSS3262 A07 13700822 3e-62 LG1 31.4
RSS3922 A07 13702440 2e-91 LG1 31.4
RSS3963 A07 13491750 4e-51 LG1 32.0
RSS0313 A07 13493374 2e-65 LG1 32.0
RSS0797 A07 13502901 5e-86 LG1 32.0
RSS1371 A07 13502862 4e-90 LG1 32.7
RSS0553 A07 16976841 3e-91 LG1 54.4
RSS0291 A07 17070355 1e-87 LG1 56.2
RSS0893 A07 21228721 1e-85 LG1 63.4
RSS0043 A07 21228676 6e-36 LG1 63.6
RSS1241 A07 21108797 9e-64 LG1 63.8
RSS1896 A07 21082508 3e-82 LG1 64.2
RSS3091 A07 20869454 5e-49 LG1 65.4
RSS2593 A07 20869349 2e-06 LG1 65.5
RSS3615 A07 14839902 5e-95 LG1 66.1
RSS1781 A07 20388372 1e-118 LG1 66.9
RSS0675 A07 20814863 8e-93 LG1 70.6
RSS0577 A07 20545913 1e-62 LG1 71.7
RSS3362 A07 20268516 5e-85 LG1 83.9
RSS1106 A07 64231 3e-61 LG2 3.5
RSS0881 A07 36044 4e-37 LG2 5.0
RSS2657 A07 1540555 1e-105 LG2 62.8
RSS2217 A07 1018815 1e-79 LG2 67.2
RSS2008 A07 3854563 1e-90 LG3 51.0
RSS1146 A07 3590450 2e-91 LG3 53.0
RSS1795 A07 3263965 5e-72 LG3 130.0
RSS3015 A07 15981801 2e-17 LG3 147.9
RSS0371 A07 11639156 1e-90 LG4 5.5
RSS1902 A07 12073599 6e-59 LG4 23.5
RSS1710 A07 15000729 6e-33 LG4 57.6
RSS1284 A07 4344205 3e-17 LG4 60.4
RSS2079 A07 17063201 2e-48 LG4 64.2
RSS2958 A07 17423374 8e-95 LG5 21.2
RSS2721 A07 13032261 0.036 LG5 27.7
RSS1032 A07 16305602 4e-15 LG5 120.5
RSS0129 A07 22531574 1e-118 LG6 11.0
RSS2168 A07 22407440 5e-36 LG6 12.3
RSS2147 A07 10054088 6e-30 LG6 12.5
RSS4036 A07 21969175 2e-14 LG6 13.5
RSS1369 A07 18270863 1e-52 LG6 19.4
RSS1177 A07 18471165 1e-57 LG6 20.8
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 362


MarkerDB | Raphanus sativus