Radish Marker Database

B. rapa genome (v1.2) list : A07

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 362


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3022 A07 7508458 1e-57
RSS3946 A07 7542197 9e-83
RSS2288 A07 7542204 3e-41
RSS1463 A07 7544507 5e-41
RSS0414 A07 7608424 5e-13
RSS2406 A07 7796331 1e-109
RSS3415 A07 7796853 1e-103
RSS0159 A07 8100056 1e-92
RSS2644 A07 8143770 1e-104
RSS2088 A07 8220132 0.001
RSS1357 A07 8326754 1e-115
RSS2905 A07 8513125 1e-19
RSS3731 A07 8561751 6e-86
RSS1526 A07 8839829 4e-86
RSS0176 A07 8851802 3e-09
RSS2536 A07 8858057 1e-114
RSS3209 A07 8889546 1e-114
RSS0846 A07 8953367 1e-117
RSS3912 A07 8953397 1e-112
RSS3481 A07 9046397 2e-50
RSS3497 A07 9109017 2e-39
RSS3646 A07 9115567 0.067
RSS2186 A07 9294578 4e-53
RSS1541 A07 9344428 5e-73
RSS3444 A07 9351177 8e-75
RSS0775 A07 9495770 8e-92
RSS2065 A07 9596168 7e-96
RSS3711 A07 9638053 3e-90
RSS3748 A07 9766344 1e-82
RSS2109 A07 9805642 1e-103
RSS2150 A07 9830007 2e-61
RSS0363 A07 9830370 1e-102
RSS3549 A07 9830817 4e-98
RSS2867 A07 9836539 1e-124
RSS1505 A07 9906849 1e-128
RSS2628 A07 10009929 1e-108
RSS0889 A07 10052639 1e-108
RSS2147 A07 10054088 6e-30 LG6 12.5
RSS3221 A07 10209023 1e-105
RSS2569 A07 10453998 3e-93
RSS3341 A07 10470776 2e-92
RSS2755 A07 10612651 1e-121
RSS3479 A07 10662316 1e-47
RSS1651 A07 10662316 8e-34
RSS3192 A07 10968794 2e-63
RSS1984 A07 11013816 2e-80
RSS0719 A07 11070347 4e-20
RSS3569 A07 11132967 4e-99
RSS1316 A07 11251368 1e-99
RSS2172 A07 11301141 2e-11
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 362


MarkerDB | Raphanus sativus