Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0010 A06 17199007 2e-46
RSS0020 A06 15017142 1e-64 LG3 123.8
RSS0033 A06 22917306 3e-71 LG4 92.8
RSS0038 A06 7658768 1e-39
RSS0067 A06 16470148 6e-81 LG4 110.9
RSS0069 A06 22923961 9e-14
RSS0072 A06 24248814 4e-16
RSS0091 A06 18497889 1e-100
RSS0092 A06 23939802 2e-90 LG7 87.7
RSS0096 A06 18612518 4e-56
RSS0099 A06 7165470 1e-78
RSS0111 A06 19385157 1e-112
RSS0120 A06 17105989 1e-106
RSS0125 A06 16402259 2e-98 LG3 116.1
RSS0126 A06 21906672 2e-99
RSS0132 A06 7557100 3e-61
RSS0135 A06 26241896 1e-91
RSS0144 A06 10565965 3e-70 LG2 91.1
RSS0165 A06 11025259 6e-98
RSS0174 A06 12375626 7e-47
RSS0175 A06 9031015 1e-104
RSS0177 A06 6043537 1e-108
RSS0187 A06 568715 2e-83
RSS0189 A06 18471210 3e-71
RSS0201 A06 21288417 1e-92
RSS0203 A06 22911957 2e-81
RSS0204 A06 24452545 1e-116
RSS0216 A06 11484103 1e-133
RSS0219 A06 5105013 7e-79
RSS0221 A06 24189945 1e-100
RSS0223 A06 3109820 7e-12
RSS0229 A06 8616149 5e-93 LG7 25.5
RSS0254 A06 16617031 8e-98 LG2 42.2
RSS0255 A06 19556712 2e-46 LG3 126.4
RSS0272 A06 10509826 1e-93
RSS0282 A06 22732769 3e-92
RSS0290 A06 5920181 3e-63
RSS0295 A06 13616237 2e-67 LG3 76.3
RSS0296 A06 18985 5e-84
RSS0302 A06 3184632 2e-97
RSS0310 A06 11889907 1e-51 LG3 129.1
RSS0312 A06 198655 1e-119
RSS0318 A06 10127532 3e-62 LG2 90.3
RSS0323 A06 14082197 2e-21
RSS0326 A06 4064065 1e-120
RSS0338 A06 26109833 1e-98
RSS0366 A06 6595086 1e-111
RSS0369 A06 25034000 5e-99 LG4 79.8
RSS0372 A06 22583002 3e-63
RSS0384 A06 18774595 2e-60
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466


MarkerDB | Raphanus sativus