Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS2078 A06 11734929 7e-79 LG2 40.8
RSS0254 A06 16617031 8e-98 LG2 42.2
RSS0839_a A06 22583616 8e-83 LG2 49.3
RSS3534 A06 24248814 1e-108 LG2 56.4
RSS0318 A06 10127532 3e-62 LG2 90.3
RSS1066 A06 12614635 1e-94 LG2 90.8
RSS0144 A06 10565965 3e-70 LG2 91.1
RSS1276 A06 10764669 2e-43 LG2 92.6
RSS1104 A06 13691045 8e-74 LG2 94.8
RSS0660 A06 19405846 4e-34 LG2 96.9
RSS2167 A06 2857597 1e-102 LG2 121.6
RSS1381 A06 12330350 1e-46 LG3 49.2
RSS2770 A06 1920304 1e-23 LG3 53.8
RSS2290 A06 20217319 3e-98 LG3 58.8
RSS3089 A06 10208016 1e-146 LG3 74.3
RSS1246 A06 13597158 4e-41 LG3 75.5
RSS0295 A06 13616237 2e-67 LG3 76.3
RSS0430_a A06 1575948 1e-123 LG3 104.1
RSS0485 A06 1751819 1e-129 LG3 104.4
RSS0609 A06 896283 2e-94 LG3 107.6
RSS3177 A06 893854 4e-83 LG3 108.5
RSS1774 A06 22197769 1e-24 LG3 110.8
RSS3635 A06 14985851 4e-79 LG3 114.1
RSS0125 A06 16402259 2e-98 LG3 116.1
RSS0640 A06 14319151 8e-46 LG3 122.8
RSS0020 A06 15017142 1e-64 LG3 123.8
RSS1445 A06 14776412 6e-81 LG3 124.3
RSS2179 A06 14745796 4e-86 LG3 124.5
RSS2428 A06 14574016 3e-46 LG3 125.2
RSS1293 A06 14577560 2e-82 LG3 125.2
RSS0255 A06 19556712 2e-46 LG3 126.4
RSS1155 A06 18899402 2e-68 LG3 127.4
RSS2459 A06 19275634 5e-39 LG3 127.6
RSS2078_a A06 11734929 7e-79 LG3 128.2
RSS0310 A06 11889907 1e-51 LG3 129.1
RSS2289 A06 11891642 1e-36 LG3 129.3
RSS3919 A06 18130281 3e-04 LG4 75.6
RSS3516 A06 25665848 4e-75 LG4 77.1
RSS0369 A06 25034000 5e-99 LG4 79.8
RSS3616 A06 25595422 2e-76 LG4 85.6
RSS3637 A06 21328661 2e-81 LG4 87.9
RSS0033 A06 22917306 3e-71 LG4 92.8
RSS0936 A06 22633332 2e-43 LG4 95.2
RSS3863 A06 22533586 2e-67 LG4 95.7
RSS1418 A06 22592583 6e-41 LG4 95.7
RSS0839 A06 22583616 8e-83 LG4 96.1
RSS0396 A06 22583958 1e-105 LG4 96.1
RSS3772 A06 22187312 2e-60 LG4 97.8
RSS1127 A06 21860422 2e-86 LG4 98.1
RSS2705 A06 21853440 3e-34 LG4 98.4
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466


MarkerDB | Raphanus sativus