Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2558 A06 2857597 1e-105
RSS2167 A06 2857597 1e-102 LG2 121.6
RSS3590 A06 2881970 2e-76
RSS2005 A06 2891530 1e-101
RSS3861 A06 2937807 3e-96
RSS1093 A06 2963497 5e-70
RSS1964 A06 2990684 1e-60
RSS3932 A06 3008253 5e-71
RSS3040 A06 3088650 2e-61
RSS2592 A06 3092318 1e-124
RSS3377 A06 3109672 1e-46
RSS0223 A06 3109820 7e-12
RSS2909 A06 3163365 4e-71
RSS0302 A06 3184632 2e-97
RSS1729 A06 3315350 1e-49
RSS0730 A06 3389927 8e-97
RSS3483 A06 3504470 1e-112
RSS2226 A06 3504503 7e-90
RSS3075 A06 3605003 2e-78
RSS0438 A06 3622077 2e-74
RSS1644 A06 3766807 2e-44
RSS1778 A06 3810121 5e-28
RSS3654 A06 3835094 1e-40
RSS3336 A06 3837032 1e-110
RSS1432 A06 3863226 1e-82
RSS3872 A06 3867980 1e-100
RSS3528 A06 3919155 2e-75
RSS3090 A06 4007367 8e-49 LG9 61.1
RSS0326 A06 4064065 1e-120
RSS0876 A06 4065322 1e-116
RSS2390 A06 4244815 1e-113
RSS3162 A06 4266292 1e-152
RSS1546 A06 4368641 1e-122
RSS0981 A06 4384801 3e-86
RSS1226 A06 4507513 1e-139
RSS2091 A06 4529100 8e-83
RSS2251 A06 4696660 1e-106
RSS3283 A06 4910769 3e-38
RSS2127 A06 4937270 7e-94
RSS4009 A06 5096297 1e-95
RSS0219 A06 5105013 7e-79
RSS2047 A06 5117305 2e-91 LG9 56.5
RSS0946 A06 5125236 3e-82
RSS1766 A06 5126088 1e-107
RSS2426 A06 5239933 1e-107
RSS0627 A06 5569831 1e-40
RSS3078 A06 5584791 3e-54 LG7 19.3
RSS3443 A06 5635537 1e-108
RSS2421 A06 5664175 7e-85
RSS3755 A06 5666279 2e-68
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466

MarkerDB | Raphanus sativus