Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0607 A05 18870519 1e-110 LG3 35.3
RSS1835 A05 18873462 1e-118
RSS0508 A05 19021068 2e-18
RSS0944 A05 19034301 1e-83
RSS1631 A05 19099888 1e-141
RSS0138 A05 19148951 3e-58
RSS3996 A05 19169485 7e-85
RSS0606 A05 19228661 4e-51 LG3 67.2
RSS1561 A05 19308677 1e-106
RSS3910 A05 19309209 7e-93
RSS3819 A05 19416283 1e-50
RSS3499 A05 19498522 9e-69
RSS0599 A05 19535652 1e-86 LG3 32.3
RSS3106 A05 19554674 1e-173
RSS1281 A05 19571846 1e-138
RSS1695 A05 19616594 2e-57
RSS3502 A05 19714500 2e-79
RSS3098 A05 19777695 3e-54
RSS2802 A05 19932239 1e-72
RSS1891 A05 19945762 1e-103
RSS0693 A05 19962386 5e-10
RSS3037 A05 19967120 1e-137
RSS1901 A05 20008508 1e-102
RSS1719 A05 20169297 1e-115 LG3 29.0
RSS3328 A05 20276715 1e-59 LG3 56.3
RSS1697 A05 20285111 1e-112 LG3 26.9
RSS0618 A05 20315362 2e-98
RSS3895 A05 20493369 2e-83 LG3 27.7
RSS3944 A05 20546666 2e-43
RSS0848 A05 20593127 3e-70
RSS0496 A05 20600900 3e-66 LG9 0.0
RSS3506 A05 20627847 2e-90
RSS2933 A05 20689222 1e-122
RSS0837 A05 20738554 3e-91
RSS3152 A05 20762661 9e-98
RSS0258 A05 20822120 1e-139 LG3 23.1
RSS0633 A05 20840294 4e-18
RSS2124 A05 20911983 5e-42
RSS1873 A05 21040920 2e-78
RSS0231 A05 21059332 3e-83
RSS2529 A05 21090119 6e-57
RSS3594 A05 21104936 1e-119
RSS1451 A05 21111973 3e-09
RSS1153 A05 21116660 3e-81 LG3 21.2
RSS2223 A05 21161988 4e-12
RSS1205 A05 21162662 0.051
RSS3994 A05 21176241 4e-95
RSS3828 A05 21262787 8e-65 LG3 21.0
RSS2505 A05 21264179 3e-84 LG2 11.3
RSS0089 A05 21337418 2e-48
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367


MarkerDB | Raphanus sativus