Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2915 A03 22759429 3e-95
RSS2561 A03 22838097 2e-88
RSS1470 A03 22843302 8e-80
RSS2590 A03 22843900 1e-112
RSS1678 A03 22859163 3e-68
RSS2833 A03 22898517 3e-47
RSS0900 A03 22906585 2e-70
RSS1524 A03 22926598 4e-34
RSS1927 A03 22957415 1e-116
RSS4034 A03 22997496 2e-83
RSS3799 A03 23116854 1e-106 LG4 122.7
RSS0666 A03 23177313 2e-89
RSS0179 A03 23180369 6e-19
RSS0253 A03 23180375 2e-32
RSS0557 A03 23203229 1e-74
RSS0061 A03 23220917 1e-117
RSS2846 A03 23291948 1e-101 LG4 120.8
RSS0031 A03 23433120 1e-115 LG4 124.6
RSS0465 A03 23433135 1e-105
RSS2474 A03 23554091 3e-85 LG4 125.0
RSS2409 A03 23561922 6e-80 LG4 125.0
RSS2783 A03 23822828 6e-41 LG4 125.5
RSS2125 A03 24044289 7e-33
RSS2070 A03 24164427 1e-104
RSS2708 A03 24169853 9e-74 LG4 127.7
RSS1868 A03 24230637 1e-53
RSS3111 A03 24260743 2e-71
RSS3949 A03 24406140 3e-32
RSS2052 A03 24476694 1e-65
RSS1355 A03 24536394 2e-21 LG3 59.9
RSS3623 A03 24767728 1e-134
RSS1248 A03 24826897 3e-23
RSS2341 A03 25087687 9e-37 LG5 111.4
RSS0141 A03 25342506 1e-24
RSS3649 A03 25444123 2e-56 LG4 128.6
RSS2439 A03 25683963 2e-75 LG4 129.1
RSS3205 A03 25722056 1e-39
RSS2283 A03 25750972 5e-99
RSS1557 A03 25777940 7e-69
RSS1058 A03 25823573 1e-74
RSS1187 A03 26078099 1e-108
RSS2936 A03 26148179 2e-88
RSS0233 A03 26160188 1e-103
RSS0863 A03 26223147 9e-43
RSS1924 A03 26318262 2e-82
RSS2134 A03 26335630 0.001
RSS0156 A03 26343854 4e-25 LG5 102.8
RSS1007 A03 26375724 3e-93
RSS0266 A03 26423509 4e-04
RSS0342 A03 26444364 1e-122
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519

MarkerDB | Raphanus sativus