Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3222 A03 17173349 6e-55
RSS1944 A03 17214437 3e-74
RSS1638 A03 17376745 3e-30
RSS0451 A03 17376748 1e-110
RSS2792 A03 17612677 3e-91
RSS2387 A03 17629672 9e-60
RSS3062 A03 17824286 4e-58
RSS2208 A03 17918657 6e-31
RSS0680 A03 18048469 1e-105
RSS2309 A03 18189976 1e-143
RSS2985 A03 18346844 1e-106
RSS3964 A03 18427824 2e-62
RSS2799 A03 18576205 8e-92
RSS3768 A03 18589974 2e-87
RSS1430 A03 18595299 5e-68
RSS3538 A03 18638462 4e-66
RSS0636 A03 18877278 7e-59
RSS1623 A03 18877384 1e-141
RSS3069 A03 19190076 1e-101
RSS2100 A03 19213125 2e-70
RSS0966 A03 19306203 2e-67
RSS1137 A03 19388446 8e-64
RSS0737 A03 19433731 4e-82
RSS2890 A03 19514017 2e-40
RSS4035 A03 19521303 5e-94
RSS0029 A03 19568286 1e-81
RSS0343 A03 19621916 3e-67
RSS0086 A03 19646841 1e-108
RSS1735 A03 19808290 6e-95
RSS1164 A03 19885101 7e-66
RSS1879 A03 20020238 3e-95
RSS1402 A03 20054804 7e-70
RSS1426 A03 20128942 3e-88
RSS0383 A03 20134154 9e-74
RSS3376 A03 20146202 1e-111
RSS3266 A03 20175770 6e-62
RSS3593 A03 20184323 1e-125
RSS0610 A03 20240592 3e-69
RSS3092 A03 20310315 4e-91
RSS1685 A03 20438489 1e-94
RSS0668 A03 20521654 3e-92
RSS3392 A03 20538546 5e-52
RSS3188 A03 20552147 6e-72
RSS3737 A03 20586657 1e-48
RSS1173 A03 20611023 8e-55
RSS2780 A03 21002801 1e-99
RSS1225 A03 21020431 1e-114
RSS1144 A03 21028088 7e-97
RSS1740 A03 21091619 1e-89
RSS1507 A03 21092055 1e-105
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519


MarkerDB | Raphanus sativus