Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2298 A03 14324323 2e-91
RSS2306 A03 366342 2e-94
RSS2307 A03 1554451 1e-100
RSS2309 A03 18189976 1e-143
RSS2318 A03 30957071 8e-66
RSS2332 A03 21887653 1e-119
RSS2341 A03 25087687 9e-37 LG5 111.4
RSS2350 A03 16673027 1e-46
RSS2352 A03 808423 4e-84
RSS2362_a A03 7820970 2e-68 LG8 43.2
RSS2376 A03 27102759 9e-94
RSS2387 A03 17629672 9e-60
RSS2403 A03 2554816 5e-86 LG8 72.5
RSS2409 A03 23561922 6e-80 LG4 125.0
RSS2422 A03 14312790 9e-74
RSS2425 A03 15593833 2e-32
RSS2439 A03 25683963 2e-75 LG4 129.1
RSS2458 A03 6359907 2e-99
RSS2474 A03 23554091 3e-85 LG4 125.0
RSS2488 A03 10983137 8e-72
RSS2516 A03 7804185 1e-114 LG9 7.3
RSS2530 A03 3122735 4e-88
RSS2531 A03 30442460 1e-92
RSS2534 A03 18872608 1e-30 LG3 138.2
RSS2543 A03 10134214 1e-93 LG8 25.0
RSS2545 A03 28699886 2e-37
RSS2550 A03 6860691 2e-64
RSS2559 A03 30146151 4e-90 LG4 136.0
RSS2561 A03 22838097 2e-88
RSS2566 A03 6317773 1e-84
RSS2568 A03 14330926 1e-108
RSS2583 A03 30347273 1e-118
RSS2590 A03 22843900 1e-112
RSS2594 A03 4354344 7e-29 LG5 38.3
RSS2607 A03 12378681 6e-85
RSS2609 A03 5182584 8e-43
RSS2617 A03 21504799 5e-92
RSS2618 A03 8738724 1e-118
RSS2627 A03 1553632 2e-99
RSS2634 A03 3826261 7e-85 LG8 68.0
RSS2635 A03 14904399 4e-65
RSS2636 A03 6563813 6e-62
RSS2670 A03 2055830 9e-63
RSS2672 A03 5019862 1e-114
RSS2676 A03 2892518 2e-45
RSS2682 A03 12373031 6e-62
RSS2688 A03 2722554 3e-95
RSS2704 A03 16903637 9e-41
RSS2708 A03 24169853 9e-74 LG4 127.7
RSS2730 A03 30105457 3e-71 LG5 130.7
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519

MarkerDB | Raphanus sativus