Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3620 A03 6987187 5e-93
RSS1148 A03 6987187 2e-84
RSS2857 A03 7049035 1e-104
RSS0355 A03 7072362 2e-44
RSS1383 A03 7080159 5e-56
RSS0022 A03 7417842 1e-104
RSS1604 A03 7481759 1e-101
RSS0586 A03 7503047 1e-107
RSS3160 A03 7624893 7e-10
RSS3697 A03 7638697 9e-51
RSS2887 A03 7793187 1e-82
RSS0095 A03 7804536 2e-38
RSS3806 A03 7820958 2e-97
RSS0873 A03 8079076 2e-56
RSS1582 A03 8160329 8e-62
RSS3335 A03 8408969 3e-48
RSS3485 A03 8419554 1e-54
RSS0134 A03 8525245 2e-91
RSS3254 A03 8592390 1e-112
RSS3430 A03 8683887 1e-109
RSS3345 A03 8708921 1e-114
RSS2618 A03 8738724 1e-118
RSS3618 A03 8810429 3e-82
RSS0218 A03 9130069 1e-120
RSS0350 A03 9130072 4e-80
RSS0283 A03 9166764 1e-68
RSS0538 A03 9237098 3e-43
RSS0852 A03 9304836 1e-122
RSS2213 A03 9309623 5e-97
RSS1572 A03 9479397 5e-94
RSS1387 A03 9501346 1e-73
RSS2123 A03 9529622 7e-70
RSS3536 A03 9619433 1e-123
RSS1713 A03 9878054 9e-57
RSS1456 A03 9928490 2e-93
RSS1449 A03 9974571 3e-54
RSS0115 A03 10026012 1e-102
RSS3358 A03 10030600 1e-113
RSS1587 A03 10048605 4e-65
RSS3558 A03 10149568 1e-128
RSS1065 A03 10403357 1e-102
RSS2266 A03 10416876 0.003
RSS3049 A03 10442100 4e-84
RSS3810 A03 10540865 1e-126
RSS3191 A03 10627104 1e-133
RSS0628 A03 10724791 2e-93
RSS1296 A03 10768966 1e-45
RSS3130 A03 10856660 8e-90
RSS2488 A03 10983137 8e-72
RSS1120 A03 11017248 2e-36
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519


MarkerDB | Raphanus sativus