Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3806 A03 7820958 2e-97
RSS2362_a A03 7820970 2e-68 LG8 43.2
RSS3503 A03 8073480 5e-59 LG2 135.0
RSS0873 A03 8079076 2e-56
RSS2207 A03 8138560 1e-108 LG8 42.2
RSS1582 A03 8160329 8e-62
RSS3335 A03 8408969 3e-48
RSS3485 A03 8419554 1e-54
RSS3372 A03 8459075 3e-71 LG2 137.9
RSS0134 A03 8525245 2e-91
RSS3254 A03 8592390 1e-112
RSS2174 A03 8648699 3e-45 LG8 38.5
RSS3430 A03 8683887 1e-109
RSS3345 A03 8708921 1e-114
RSS2618 A03 8738724 1e-118
RSS3618 A03 8810429 3e-82
RSS1494 A03 8823560 1e-107 LG8 37.5
RSS0218 A03 9130069 1e-120
RSS0350 A03 9130072 4e-80
RSS3166 A03 9130906 3e-81 LG8 37.1
RSS0283 A03 9166764 1e-68
RSS0538 A03 9237098 3e-43
RSS1041 A03 9249748 7e-35 LG8 33.2
RSS1258 A03 9249763 4e-18 LG8 33.7
RSS0852 A03 9304836 1e-122
RSS2213 A03 9309623 5e-97
RSS1572 A03 9479397 5e-94
RSS1387 A03 9501346 1e-73
RSS2123 A03 9529622 7e-70
RSS3536 A03 9619433 1e-123
RSS1713 A03 9878054 9e-57
RSS1456 A03 9928490 2e-93
RSS1449 A03 9974571 3e-54
RSS0115 A03 10026012 1e-102
RSS3358 A03 10030600 1e-113
RSS1587 A03 10048605 4e-65
RSS2543 A03 10134214 1e-93 LG8 25.0
RSS3558 A03 10149568 1e-128
RSS0860 A03 10199251 1e-96 LG8 24.9
RSS1018 A03 10331652 2e-85 LG8 23.9
RSS1065 A03 10403357 1e-102
RSS2266 A03 10416876 0.003
RSS3049 A03 10442100 4e-84
RSS3810 A03 10540865 1e-126
RSS3191 A03 10627104 1e-133
RSS0628 A03 10724791 2e-93
RSS1296 A03 10768966 1e-45
RSS3130 A03 10856660 8e-90
RSS0050 A03 10927947 1e-29 LG2 148.7
RSS2488 A03 10983137 8e-72
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519


MarkerDB | Raphanus sativus