Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0712 A03 13107080 1e-102
RSS0718 A03 15549574 4e-54
RSS0725 A03 3497066 2e-43
RSS0737 A03 19433731 4e-82
RSS0762 A03 13883523 1e-120
RSS0774 A03 1936691 5e-50
RSS0780 A03 14158580 4e-59
RSS0782 A03 30142961 1e-123 LG2 68.2
RSS0832 A03 4938867 1e-123 LG8 69.8
RSS0842 A03 14357609 1e-106
RSS0844 A03 16503623 1e-111
RSS0852 A03 9304836 1e-122
RSS0857 A03 31173734 1e-100
RSS0860 A03 10199251 1e-96 LG8 24.9
RSS0863 A03 26223147 9e-43
RSS0873 A03 8079076 2e-56
RSS0891 A03 15910871 1e-106
RSS0900 A03 22906585 2e-70
RSS0901 A03 30989446 1e-121
RSS0904 A03 6866163 9e-34
RSS0910 A03 16880078 2e-96
RSS0932 A03 1278041 2e-59
RSS0934 A03 15276350 1e-111
RSS0959 A03 30170312 6e-42
RSS0961 A03 3584541 2e-60
RSS0966 A03 19306203 2e-67
RSS0975 A03 16156666 2e-99
RSS0997 A03 11701055 3e-05 LG9 17.0
RSS1007 A03 26375724 3e-93
RSS1018 A03 10331652 2e-85 LG8 23.9
RSS1028 A03 21836019 1e-105
RSS1041 A03 9249748 7e-35 LG8 33.2
RSS1058 A03 25823573 1e-74
RSS1065 A03 10403357 1e-102
RSS1097 A03 15601787 1e-143
RSS1102 A03 13657076 1e-38
RSS1113 A03 26923783 5e-72
RSS1117 A03 4224763 2e-67 LG8 66.3
RSS1120 A03 11017248 2e-36
RSS1137 A03 19388446 8e-64
RSS1144 A03 21028088 7e-97
RSS1148 A03 6987187 2e-84
RSS1161 A03 12251325 1e-116 LG8 12.2
RSS1164 A03 19885101 7e-66
RSS1173 A03 20611023 8e-55
RSS1183 A03 18595299 6e-68 LG3 140.0
RSS1185 A03 2126250 1e-122
RSS1187 A03 26078099 1e-108
RSS1196 A03 16054582 4e-70
RSS1221 A03 11017248 2e-36 LG2 149.9
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519


MarkerDB | Raphanus sativus