Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS3423 A03 30890209 5e-38
RSS3430 A03 8683887 1e-109
RSS3435 A03 27853321 4e-70
RSS3450 A03 16879490 1e-107 LG3 142.9
RSS3454 A03 11058644 7e-71
RSS3455 A03 2082869 4e-36
RSS3462 A03 19751862 1e-129 LG3 120.2
RSS3485 A03 8419554 1e-54
RSS3503 A03 8073480 5e-59 LG2 135.0
RSS3509 A03 29961574 1e-05
RSS3529 A03 1040812 0.013
RSS3536 A03 9619433 1e-123
RSS3538 A03 18638462 4e-66
RSS3558 A03 10149568 1e-128
RSS3565 A03 15999234 1e-103
RSS3573 A03 3563840 4e-86
RSS3580 A03 1274059 1e-126
RSS3593 A03 20184323 1e-125
RSS3618 A03 8810429 3e-82
RSS3620 A03 6987187 5e-93
RSS3621 A03 21225050 4e-71
RSS3623 A03 24767728 1e-134
RSS3630 A03 3358319 1e-91
RSS3644 A03 13772499 1e-114 LG8 7.6
RSS3649 A03 25444123 2e-56 LG4 128.6
RSS3657 A03 12251041 4e-51
RSS3682 A03 19694020 1e-109 LG3 132.2
RSS3697 A03 7638697 9e-51
RSS3701 A03 28281751 9e-27
RSS3704 A03 11137301 2e-92
RSS3726 A03 2820023 8e-82
RSS3737 A03 20586657 1e-48
RSS3763 A03 1851413 2e-79
RSS3768 A03 18589974 2e-87
RSS3784 A03 12679903 1e-77
RSS3788 A03 6557480 1e-126
RSS3792 A03 5244703 4e-83
RSS3799 A03 23116854 1e-106 LG4 122.7
RSS3800 A03 15774314 9e-70
RSS3806 A03 7820958 2e-97
RSS3810 A03 10540865 1e-126
RSS3816 A03 3073872 1e-128
RSS3833 A03 13697239 2e-73
RSS3840 A03 12552683 1e-122
RSS3851 A03 27907801 2e-93
RSS3862 A03 22371610 8e-76
RSS3867 A03 12402489 1e-114
RSS3868 A03 14073058 2e-85
RSS3890 A03 31183011 5e-68
RSS3899 A03 31078523 5e-10
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519

MarkerDB | Raphanus sativus