Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS2856 A03 43459 1e-67
RSS3962 A03 67288 2e-74
RSS1377 A03 146494 5e-18 LG8 85.4
RSS2914_a A03 349527 1e-78 LG1 109.7
RSS2306 A03 366342 2e-94
RSS2246 A03 474674 5e-98
RSS1224 A03 475577 2e-70
RSS3236 A03 701107 1e-101
RSS1908 A03 728906 3e-11
RSS1365 A03 789492 1e-109
RSS2352 A03 808423 4e-84
RSS1814 A03 859864 1e-106
RSS1702 A03 866397 8e-96
RSS2198 A03 871455 8e-98
RSS0105 A03 883752 9e-49
RSS2937 A03 884510 6e-47
RSS0150 A03 905231 5e-63
RSS2877 A03 910083 8e-57
RSS2054 A03 915814 3e-78
RSS0164 A03 930171 1e-135
RSS0622 A03 973755 1e-48
RSS3529 A03 1040812 0.013
RSS0354 A03 1239538 3e-35
RSS3580 A03 1274059 1e-126
RSS0395 A03 1277188 2e-30
RSS0932 A03 1278041 2e-59
RSS3168 A03 1499296 1e-31 LG8 83.5
RSS2627 A03 1553632 2e-99
RSS2307 A03 1554451 1e-100
RSS3103 A03 1595969 1e-140
RSS4033 A03 1629124 1e-114
RSS2059 A03 1687030 2e-62
RSS0611 A03 1692397 6e-49
RSS3763 A03 1851413 2e-79
RSS1858 A03 1911768 1e-115
RSS2169 A03 1912047 3e-48
RSS0774 A03 1936691 5e-50
RSS0486 A03 2014435 3e-89 LG8 74.5
RSS2764 A03 2049433 3e-84 LG8 74.3
RSS2670 A03 2055830 9e-63
RSS3455 A03 2082869 4e-36
RSS0055 A03 2115863 1e-89
RSS1185 A03 2126250 1e-122
RSS2067 A03 2229387 3e-68
RSS1252 A03 2314332 2e-66 LG9 11.3
RSS1717 A03 2314675 1e-86
RSS1733 A03 2378310 1e-88
RSS2235 A03 2428187 4e-08
RSS1997 A03 2485053 5e-94
RSS1384 A03 2526334 1e-114
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519


MarkerDB | Raphanus sativus