Radish Marker Database

B. rapa genome (v1.2) list : A02

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 320


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3540 A02 789797 1e-112 LG1 0.0
RSS1737 A02 14031766 1e-49 LG1 64.6
RSS1752 A02 5022455 5e-64 LG1 73.0
RSS2706 A02 4754459 5e-41 LG1 107.5
RSS1574 A02 1737499 7e-60 LG1 109.3
RSS0080 A02 1737870 8e-26 LG1 109.3
RSS0239 A02 1966690 1e-48 LG1 110.0
RSS0284 A02 129690 5e-06 LG2 0.0
RSS0727 A02 26119174 3e-75 LG2 39.8
RSS2865 A02 21962386 7e-72 LG2 47.5
RSS1338 A02 22098688 5e-62 LG2 51.1
RSS0049 A02 21087074 9e-82 LG2 55.1
RSS3754 A02 19012821 1e-100 LG2 58.3
RSS3694 A02 23285494 1e-113 LG3 9.5
RSS0822 A02 13116875 8e-79 LG5 0.0
RSS1885 A02 14058471 3e-90 LG5 2.5
RSS0477 A02 13572372 2e-59 LG5 4.2
RSS1262 A02 11355400 2e-58 LG5 13.2
RSS3268 A02 11322095 3e-97 LG5 15.4
RSS3138 A02 9149251 9e-84 LG5 18.5
RSS1798 A02 9938616 1e-121 LG5 24.2
RSS2889 A02 9068031 1e-66 LG5 28.4
RSS0968 A02 17232148 4e-77 LG5 31.8
RSS2081 A02 16821475 2e-18 LG5 34.5
RSS0373 A02 16726566 1e-31 LG5 35.4
RSS2572 A02 16702509 1e-127 LG5 35.6
RSS3934 A02 16157341 1e-54 LG5 38.2
RSS0119 A02 5445884 1e-101 LG5 58.4
RSS3736 A02 5708873 1e-126 LG5 59.1
RSS2394 A02 5795811 8e-48 LG5 59.6
RSS1341 A02 5762170 2e-83 LG5 59.7
RSS1076 A02 5795811 9e-78 LG5 60.1
RSS1031 A02 3946301 2e-47 LG5 104.3
RSS1532 A02 6254749 3e-69 LG6 33.6
RSS3495 A02 1710440 1e-111 LG6 62.8
RSS2934 A02 16821418 3e-08 LG6 65.7
RSS0404 A02 16821418 6e-08 LG6 67.0
RSS1063 A02 3630352 2e-14 LG6 82.3
RSS2684 A02 7277078 9e-06 LG7 87.3
RSS0805 A02 20650394 7e-40 LG7 89.9
RSS3933 A02 8779025 1e-06 LG8 0.0
RSS0789 A02 5384771 1e-82 LG8 65.5
RSS0692 A02 5372781 1e-60 LG8 66.3
RSS1743 A02 4785319 5e-86 LG8 67.3
RSS1162 A02 10800 2e-51
RSS2254 A02 119481 2e-61
RSS0329 A02 238633 1e-107
RSS1159 A02 294839 4e-73
RSS1210 A02 370653 4e-56
RSS0849 A02 394112 3e-91
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 320


MarkerDB | Raphanus sativus