Radish Marker Database

B. rapa genome (v1.2) list : A02

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 320


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS3747 A02 15366248 8e-65
RSS3753 A02 457724 8e-73
RSS3754 A02 19012821 1e-100 LG2 58.3
RSS3823 A02 4172305 6e-46
RSS3826 A02 11448244 1e-105
RSS3848 A02 15174931 2e-70
RSS3850 A02 23105599 8e-87
RSS3869 A02 17299845 2e-99
RSS3881 A02 12146756 2e-62
RSS3892 A02 27243246 3e-54
RSS3927 A02 11448151 1e-109
RSS3933 A02 8779025 1e-06 LG8 0.0
RSS3934 A02 16157341 1e-54 LG5 38.2
RSS3938 A02 15564900 2e-69
RSS3942 A02 13056949 2e-65
RSS3947 A02 9045590 2e-07
RSS3970 A02 12428725 7e-38
RSS3981 A02 8411842 1e-96
RSS3989 A02 22149605 2e-55
RSS4017 A02 26760577 1e-104
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 320

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