Radish Marker Database

B. rapa genome (v1.2) list : A02

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 320


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3147 A02 3563811 2e-12
RSS3206 A02 15667806 2e-89
RSS3217 A02 22007209 4e-89
RSS3228 A02 15871340 2e-39
RSS3230 A02 720668 1e-119
RSS3232 A02 3382046 1e-91
RSS3260 A02 27117301 1e-92
RSS3268 A02 11322095 3e-97 LG5 15.4
RSS3274 A02 27232648 2e-70
RSS3296 A02 939466 1e-89
RSS3300 A02 16890709 2e-37
RSS3304 A02 7390715 5e-66
RSS3390 A02 22857489 2e-96
RSS3393 A02 21086403 1e-101
RSS3396 A02 3272481 1e-101
RSS3399 A02 22929553 4e-12
RSS3410 A02 2226520 1e-122
RSS3417 A02 11725689 1e-54
RSS3429 A02 3275206 7e-99
RSS3433 A02 24732565 3e-18
RSS3456 A02 21923358 2e-48
RSS3472 A02 12897858 1e-06
RSS3492 A02 5570196 1e-30
RSS3495 A02 1710440 1e-111 LG6 62.8
RSS3511 A02 7019997 2e-75
RSS3518 A02 451458 1e-45
RSS3520 A02 10887858 2e-64
RSS3531 A02 1006121 2e-83
RSS3535 A02 7019026 3e-74
RSS3537 A02 21656608 1e-51
RSS3540 A02 789797 1e-112 LG1 0.0
RSS3555 A02 20154524 7e-67
RSS3560 A02 1194524 1e-110
RSS3571 A02 15859031 3e-90
RSS3631 A02 24818376 2e-36
RSS3643 A02 7517074 4e-87
RSS3653 A02 16911548 1e-101
RSS3669 A02 27116722 2e-72
RSS3675 A02 1765721 6e-66
RSS3685 A02 5701132 6e-89
RSS3689 A02 14032185 9e-90
RSS3692 A02 19910548 1e-107
RSS3694 A02 23285494 1e-113 LG3 9.5
RSS3709 A02 14032095 3e-79
RSS3710 A02 12158705 2e-92
RSS3714 A02 840072 1e-57
RSS3718 A02 12000405 6e-96
RSS3720 A02 1082169 2e-91
RSS3725 A02 878081 4e-47
RSS3736 A02 5708873 1e-126 LG5 59.1
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 320


MarkerDB | Raphanus sativus