Radish Marker Database

B. rapa genome (v1.2) list : A02

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 320


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS2866 A02 22123634 4e-80
RSS2789 A02 22140950 2e-88
RSS3989 A02 22149605 2e-55
RSS1706 A02 22233153 1e-109
RSS3146 A02 22233153 3e-90
RSS2793 A02 22374884 6e-62
RSS0398 A02 22427804 1e-87
RSS2555 A02 22435814 1e-41
RSS0389 A02 22827866 1e-135
RSS0311 A02 22828064 2e-53
RSS2854 A02 22831098 1e-135
RSS3390 A02 22857489 2e-96
RSS3399 A02 22929553 4e-12
RSS0463 A02 23087468 5e-97
RSS3850 A02 23105599 8e-87
RSS2055 A02 23152060 1e-113
RSS1454 A02 23153220 3e-91
RSS1339 A02 23158055 1e-101
RSS2845 A02 23276621 4e-78
RSS3694 A02 23285494 1e-113 LG3 9.5
RSS2475 A02 23301286 3e-35
RSS1493 A02 23495479 1e-37
RSS1422 A02 23510701 2e-31
RSS0044 A02 23655658 1e-91
RSS1069 A02 23655997 6e-99
RSS2808 A02 23706586 1e-111
RSS0903 A02 23816538 9e-68
RSS2451 A02 23867294 1e-30
RSS2734 A02 23867309 4e-61
RSS3006 A02 23886934 2e-68
RSS2366 A02 23943277 3e-77
RSS1396 A02 24059681 2e-26
RSS0696 A02 24151194 9e-09
RSS3104 A02 24461666 6e-67
RSS1982 A02 24536127 2e-46
RSS3433 A02 24732565 3e-18
RSS3631 A02 24818376 2e-36
RSS2521 A02 24897280 9e-79
RSS1742 A02 25021331 1e-120
RSS1101 A02 25035265 6e-94
RSS0453 A02 25035938 5e-47
RSS1672 A02 25195520 3e-72
RSS1308 A02 25563669 9e-46
RSS1412 A02 25572996 1e-75
RSS1669 A02 25698560 1e-84
RSS1029 A02 25698560 9e-84
RSS1947 A02 25970294 7e-75
RSS0727 A02 26119174 3e-75 LG2 39.8
RSS1118 A02 26227413 1e-118
RSS2885 A02 26267294 2e-19
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 320


MarkerDB | Raphanus sativus