Radish Marker Database

B. rapa genome (v1.2) list : A02

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 320


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2611 A02 9623148 1e-133
RSS2616 A02 6475525 1e-104
RSS2625 A02 14303088 8e-78
RSS2642 A02 9509708 1e-61
RSS2652 A02 21638469 1e-113
RSS2666 A02 5481864 2e-92
RSS2684 A02 7277078 9e-06 LG7 87.3
RSS2706 A02 4754459 5e-41 LG1 107.5
RSS2723 A02 2024822 6e-48
RSS2726 A02 21781121 2e-97
RSS2728 A02 26620134 8e-97
RSS2732 A02 3650622 1e-119
RSS2734 A02 23867309 4e-61
RSS2743 A02 1043787 8e-56
RSS2747 A02 5574238 2e-30
RSS2748 A02 7817350 1e-104
RSS2762 A02 3298868 4e-75
RSS2789 A02 22140950 2e-88
RSS2793 A02 22374884 6e-62
RSS2806 A02 17297132 1e-106
RSS2808 A02 23706586 1e-111
RSS2813 A02 10531657 1e-83
RSS2824 A02 15702770 4e-57
RSS2828 A02 10790871 1e-101
RSS2845 A02 23276621 4e-78
RSS2854 A02 22831098 1e-135
RSS2865 A02 21962386 7e-72 LG2 47.5
RSS2866 A02 22123634 4e-80
RSS2885 A02 26267294 2e-19
RSS2889 A02 9068031 1e-66 LG5 28.4
RSS2910 A02 19404937 2e-50
RSS2934 A02 16821418 3e-08 LG6 65.7
RSS2939 A02 27362140 4e-99
RSS2940 A02 15949903 6e-71
RSS2946 A02 9178963 2e-61
RSS2947 A02 10049230 1e-123
RSS2955 A02 2024554 3e-25
RSS2972 A02 2673546 6e-80
RSS2999 A02 16114707 1e-45
RSS3004 A02 645378 1e-106
RSS3006 A02 23886934 2e-68
RSS3023 A02 7955344 4e-63
RSS3032 A02 13657259 1e-68
RSS3036 A02 15912620 1e-68
RSS3047 A02 13868494 2e-90
RSS3063 A02 7715619 1e-110
RSS3081 A02 11227812 1e-112
RSS3104 A02 24461666 6e-67
RSS3138 A02 9149251 9e-84 LG5 18.5
RSS3146 A02 22233153 3e-90
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 320

MarkerDB | Raphanus sativus