Radish Marker Database

B. rapa genome (v1.2) list : A02

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 320


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1308 A02 25563669 9e-46
RSS1321 A02 13978160 2e-91
RSS1338 A02 22098688 5e-62 LG2 51.1
RSS1339 A02 23158055 1e-101
RSS1341 A02 5762170 2e-83 LG5 59.7
RSS1394 A02 21553815 5e-98
RSS1396 A02 24059681 2e-26
RSS1411 A02 16274900 1e-86
RSS1412 A02 25572996 1e-75
RSS1416 A02 10049906 5e-73
RSS1422 A02 23510701 2e-31
RSS1441 A02 5134757 3e-45
RSS1454 A02 23153220 3e-91
RSS1482 A02 26884008 6e-94
RSS1493 A02 23495479 1e-37
RSS1510 A02 10444308 1e-120
RSS1515 A02 21820548 6e-32
RSS1532 A02 6254749 3e-69 LG6 33.6
RSS1547 A02 26312076 1e-157
RSS1574 A02 1737499 7e-60 LG1 109.3
RSS1581 A02 12473180 8e-94
RSS1599 A02 27224744 1e-81
RSS1625 A02 16274504 8e-21
RSS1633 A02 7542690 4e-42
RSS1647 A02 20133713 3e-50
RSS1658 A02 3878908 1e-33
RSS1663 A02 15208609 5e-61
RSS1669 A02 25698560 1e-84
RSS1672 A02 25195520 3e-72
RSS1706 A02 22233153 1e-109
RSS1718 A02 5383474 1e-73
RSS1732 A02 8216941 4e-55
RSS1737 A02 14031766 1e-49 LG1 64.6
RSS1742 A02 25021331 1e-120
RSS1743 A02 4785319 5e-86 LG8 67.3
RSS1749 A02 14945273 1e-101
RSS1752 A02 5022455 5e-64 LG1 73.0
RSS1784 A02 4536765 1e-99
RSS1798 A02 9938616 1e-121 LG5 24.2
RSS1800 A02 5213966 2e-91
RSS1805 A02 19431245 4e-83
RSS1829 A02 7579026 1e-31
RSS1831 A02 12569471 2e-84
RSS1836 A02 11801551 1e-116
RSS1838 A02 15151609 1e-108
RSS1840 A02 1734253 2e-83
RSS1847 A02 12603541 1e-17
RSS1866 A02 3231753 4e-84
RSS1880 A02 15039800 6e-05
RSS1881 A02 6148382 8e-80
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 320

MarkerDB | Raphanus sativus