Radish Marker Database

B. rapa genome (v1.2) list : A02

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 320


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2258 A02 4072610 3e-84
RSS3823 A02 4172305 6e-46
RSS1145 A02 4232001 1e-103
RSS0871 A02 4346846 1e-134
RSS1784 A02 4536765 1e-99
RSS2540 A02 4969756 2e-93
RSS0014 A02 5022751 6e-82
RSS1441 A02 5134757 3e-45
RSS0247 A02 5203414 2e-48
RSS0970 A02 5210895 4e-63
RSS1800 A02 5213966 2e-91
RSS2524 A02 5246871 1e-102
RSS2068 A02 5323781 1e-62
RSS1718 A02 5383474 1e-73
RSS0741 A02 5384771 1e-111
RSS2666 A02 5481864 2e-92
RSS3492 A02 5570196 1e-30
RSS2747 A02 5574238 2e-30
RSS3685 A02 5701132 6e-89
RSS0306 A02 5747009 3e-14
RSS2046 A02 5935169 2e-07
RSS1881 A02 6148382 8e-80
RSS2324 A02 6395611 1e-110
RSS0823 A02 6396650 1e-124
RSS2616 A02 6475525 1e-104
RSS2447 A02 6564927 1e-109
RSS2022 A02 6572436 4e-81
RSS0681 A02 6836953 5e-30
RSS0556 A02 6896755 1e-41
RSS0509 A02 6896993 5e-37
RSS3535 A02 7019026 3e-74
RSS3511 A02 7019997 2e-75
RSS2322 A02 7106046 1e-10
RSS0495 A02 7118882 8e-40
RSS3304 A02 7390715 5e-66
RSS2528 A02 7428894 5e-41
RSS2048 A02 7512066 1e-91
RSS2137 A02 7516891 2e-07
RSS3643 A02 7517074 4e-87
RSS1633 A02 7542690 4e-42
RSS0241 A02 7578875 5e-49
RSS1829 A02 7579026 1e-31
RSS0293 A02 7672275 1e-115
RSS3063 A02 7715619 1e-110
RSS2748 A02 7817350 1e-104
RSS3023 A02 7955344 4e-63
RSS1732 A02 8216941 4e-55
RSS0552 A02 8226329 1e-76
RSS2544 A02 8247392 1e-107
RSS3981 A02 8411842 1e-96
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 320

MarkerDB | Raphanus sativus