Radish Marker Database

B. rapa genome (v1.2) list : A02

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 320


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2447 A02 6564927 1e-109
RSS2022 A02 6572436 4e-81
RSS0681 A02 6836953 5e-30
RSS0556 A02 6896755 1e-41
RSS0509 A02 6896993 5e-37
RSS3535 A02 7019026 3e-74
RSS3511 A02 7019997 2e-75
RSS2322 A02 7106046 1e-10
RSS0495 A02 7118882 8e-40
RSS2684 A02 7277078 9e-06 LG7 87.3
RSS3304 A02 7390715 5e-66
RSS2528 A02 7428894 5e-41
RSS2048 A02 7512066 1e-91
RSS2137 A02 7516891 2e-07
RSS3643 A02 7517074 4e-87
RSS1633 A02 7542690 4e-42
RSS0241 A02 7578875 5e-49
RSS1829 A02 7579026 1e-31
RSS0293 A02 7672275 1e-115
RSS3063 A02 7715619 1e-110
RSS2748 A02 7817350 1e-104
RSS3023 A02 7955344 4e-63
RSS1732 A02 8216941 4e-55
RSS0552 A02 8226329 1e-76
RSS2544 A02 8247392 1e-107
RSS3981 A02 8411842 1e-96
RSS3933 A02 8779025 1e-06 LG8 0.0
RSS3947 A02 9045590 2e-07
RSS2889 A02 9068031 1e-66 LG5 28.4
RSS3138 A02 9149251 9e-84 LG5 18.5
RSS2946 A02 9178963 2e-61
RSS2642 A02 9509708 1e-61
RSS2611 A02 9623148 1e-133
RSS1163 A02 9731399 1e-110
RSS1798 A02 9938616 1e-121 LG5 24.2
RSS2947 A02 10049230 1e-123
RSS1416 A02 10049906 5e-73
RSS2024 A02 10214762 2e-56
RSS1510 A02 10444308 1e-120
RSS2049 A02 10444308 1e-123
RSS2813 A02 10531657 1e-83
RSS2828 A02 10790871 1e-101
RSS3520 A02 10887858 2e-64
RSS3081 A02 11227812 1e-112
RSS3268 A02 11322095 3e-97 LG5 15.4
RSS0587 A02 11322683 1e-124
RSS1262 A02 11355400 2e-58 LG5 13.2
RSS3927 A02 11448151 1e-109
RSS3826 A02 11448244 1e-105
RSS1907 A02 11582412 7e-11
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 320

MarkerDB | Raphanus sativus