Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1373 A01 20526203 4e-07
RSS2441 A01 20562894 1e-92
RSS2222 A01 20700550 1e-131
RSS2680 A01 20893965 1e-104 LG2 20.2
RSS3125 A01 20893965 6e-98 LG2 20.5
RSS3306 A01 20924572 1e-66 LG2 20.3
RSS2853 A01 21251592 1e-95
RSS0895 A01 21256938 1e-126 LG2 19.3
RSS0895_a A01 21256938 1e-126 LG2 37.6
RSS1036 A01 21292294 2e-61
RSS1078 A01 21325717 5e-46
RSS2991 A01 21331101 1e-116
RSS1593 A01 21331233 2e-79
RSS0620 A01 21384655 1e-45
RSS1274 A01 21400744 6e-78
RSS2133 A01 21533111 4e-81
RSS3404 A01 21541575 5e-89
RSS1854 A01 21804541 5e-87
RSS3280 A01 22054805 1e-97
RSS2149 A01 22104392 1e-39
RSS2497 A01 22145213 3e-81 LG2 18.8
RSS2165 A01 22353226 1e-87
RSS0542 A01 22763363 1e-105
RSS1043 A01 22843265 1e-110
RSS0739 A01 23297756 3e-87
RSS1690 A01 23327711 3e-82
RSS3939 A01 23410410 3e-94
RSS2725 A01 23412435 2e-98
RSS3525 A01 23451687 1e-68
RSS3460 A01 23480412 4e-34
RSS3347 A01 23538245 1e-110
RSS0546 A01 23630857 7e-79
RSS3905 A01 23748206 4e-93
RSS2104 A01 23841452 5e-72
RSS2968 A01 23880180 3e-31 LG2 118.2
RSS0905 A01 23886899 1e-120
RSS2335 A01 23947030 2e-87 LG2 86.6
RSS2499 A01 23966086 7e-95
RSS1109 A01 24241638 5e-71
RSS1287 A01 24325585 1e-118
RSS2276 A01 24427187 1e-61
RSS0972 A01 24546009 1e-115
RSS3151 A01 24663672 2e-56
RSS3575 A01 24723690 1e-137
RSS3282 A01 24740472 3e-54
RSS0139 A01 24825620 2e-95 LG3 24.9
RSS1642 A01 24875107 2e-55
RSS0077 A01 24896599 3e-69
RSS1823 A01 25016463 4e-70
RSS1746 A01 25057232 1e-86
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407

MarkerDB | Raphanus sativus