Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch12

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1993


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
15328_509 SL2.40ch12 100420 0.0 ch12 0.0
8996_301 SL2.40ch12 242142 0.0 ch12 1.451 ch12 0.0
9542_306 SL2.40ch12 541732 0.0 ch12 2.733 ch12 2.077
TEI0791 SL2.40ch12 492043 0.0 ch12 3.268
5959_219 SL2.40ch12 746104 0.0 ch12 5.545 ch12 4.095
5141_540 SL2.40ch12 802108 0.0 ch12 5.545 ch12 4.095
533_1410 SL2.40ch12 962511 1e-127 ch12 7.425 ch12 5.126
13470_755 SL2.40ch12 1153622 0.0 ch12 10.793 ch12 6.301
6581_362 SL2.40ch12 1166421 0.0 ch12 11.734 ch12 6.693
14548_152 SL2.40ch12 1300264 0.0 ch12 13.223 ch12 7.978
9146_400 SL2.40ch12 1352542 0.0 ch12 13.223 ch12 8.802
TES0027 SL2.40ch12 1498919 1e-111 ch12 21.438 ch12 17.623
9815_870 SL2.40ch12 1835055 0.0 ch12 21.256
TGS0379 SL2.40ch12 3612741 0.0 ch01 28.393 ch12 50.799
TGS0144 SL2.40ch12 4308849 0.0 ch12 46.98 ch12 60.832
9578_326 SL2.40ch12 4462344 0.0 ch12 61.678 ch12 41.441
TGS0724 SL2.40ch12 4558753 0.0 ch12 49.877 ch12 62.202
3901_591 SL2.40ch12 4598061 0.0 ch12 62.732 ch12 42.931
TGS0456 SL2.40ch12 4766690 1e-161 ch12 48.57 ch12 63.819
5564_269 SL2.40ch12 5390224 0.0 ch12 66.529
TGS1162 SL2.40ch12 5523860 0.0 ch12 56.672 ch12 67.673
9003_1000 SL2.40ch12 5603214 0.0 ch12 68.112
TES0471 SL2.40ch12 6355464 1e-154 ch12 55.7 ch12 74.093
8231_485 SL2.40ch12 6437354 0.0 ch12 74.093
TGS0051 SL2.40ch12 35586768 0.0 ch12 76.055
TGS0506 SL2.40ch12 32481638 0.0 ch12 76.354
TGS0363 SL2.40ch12 24981786 0.0 ch12 60.199 ch12 76.686
TGS0362 SL2.40ch12 55013158 0.0 ch12 64.052 ch12 76.95
TGS0706 SL2.40ch12 7762062 0.0 ch12 76.953
TGS0339 SL2.40ch12 7855333 0.0 ch12 60.944 ch12 76.953
4403_175 SL2.40ch12 11181345 0.0 ch12 76.953
9979_667 SL2.40ch12 14535326 1e-142 ch12 76.953
TGS0043 SL2.40ch12 18094928 0.0 ch12 76.953
3937_1843 SL2.40ch12 22286049 0.0 ch12 76.953
14911_827 SL2.40ch12 49506364 0.0 ch12 76.953
TGS1106 SL2.40ch12 52066022 1e-168 ch12 76.953
TGS0428 SL2.40ch12 52589167 0.0 ch12 64.891 ch12 77.024
TGS0512 SL2.40ch12 31561162 0.0 ch12 59.508 ch12 77.059
TGS0318 SL2.40ch12 34588677 0.0 ch12 66.932 ch12 77.059
TGS1099 SL2.40ch12 54590948 0.0 ch12 77.059
TGS0279 SL2.40ch12 9678882 0.0 ch12 77.163
12921_990 SL2.40ch12 36097369 0.0 ch12 77.43
TGS1221 SL2.40ch12 36589041 0.0 ch12 77.43
TGS0658 SL2.40ch12 37167552 0.0 ch12 69.74 ch12 77.43
TGS0356 SL2.40ch12 37750157 0.0 ch12 77.43
2937_194 SL2.40ch12 40672064 1e-123 ch12 77.43
TGS1066 SL2.40ch12 20114311 0.0 ch12 77.692
TGS0199 SL2.40ch12 37219758 0.0 ch12 60.922 ch12 78.059
TGS2058 SL2.40ch12 37725064 0.0 ch12 61.27 ch12 78.976
13393_264 SL2.40ch12 43601554 0.0 ch12 79.494
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1993


MarkerDB | Solanum lycopersicum