Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch12

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1993


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
8394_210 SL2.40ch12 362665 0.0
8455_215 SL2.40ch12 511461 0.0
8530_215 SL2.40ch12 64437873 1e-112
8699_285 SL2.40ch12 63023876 0.0
8699_490 SL2.40ch12 63023876 0.0
8727_85 SL2.40ch12 5444885 1e-139
8816_1079 SL2.40ch12 63326094 0.0 ch12 92.952
887_186 SL2.40ch12 43642959 0.0
8996_301 SL2.40ch12 242142 0.0 ch12 1.451 ch12 0.0
8996_418 SL2.40ch12 242142 0.0
8996_454 SL2.40ch12 242142 0.0
9003_1000 SL2.40ch12 5603214 0.0 ch12 68.112
9010_368 SL2.40ch12 64866483 0.0 ch12 130.863 ch12 103.984
9010_698 SL2.40ch12 64866483 0.0
9089_439 SL2.40ch12 492043 0.0
9117_400 SL2.40ch12 45736238 0.0
9146_400 SL2.40ch12 1352542 0.0 ch12 13.223 ch12 8.802
9264_1817 SL2.40ch12 64494688 0.0
9264_379 SL2.40ch12 64494688 0.0
9270_638 SL2.40ch12 17502340 0.0
9374_712 SL2.40ch12 64756376 0.0
9374_746 SL2.40ch12 64756376 0.0
9407_36 SL2.40ch12 14640244 0.0
9429_784 SL2.40ch12 64722514 0.0
9429_847 SL2.40ch12 64722514 0.0 ch12 128.023
9542_306 SL2.40ch12 541732 0.0 ch12 2.733 ch12 2.077
9542_50 SL2.40ch12 541732 0.0
9542_558 SL2.40ch12 541732 0.0
9553_361 SL2.40ch12 48272142 0.0 ch12 76.386
9578_326 SL2.40ch12 4462344 0.0 ch12 61.678 ch12 41.441
9592_447 SL2.40ch12 47301419 3e-81
9592_506 SL2.40ch12 47301419 3e-81
9592_88 SL2.40ch12 47301419 3e-81
9647_478 SL2.40ch12 3056097 0.0
9799_1381 SL2.40ch12 63671835 0.0
9815_870 SL2.40ch12 1835055 0.0 ch12 21.256
9861_494 SL2.40ch12 6763305 0.0
9948_641 SL2.40ch12 6663482 1e-117
9979_667 SL2.40ch12 14535326 1e-142 ch12 76.953
C2_At3g13180 SL2.40ch12 5690380 6e-57 ch12 56.419
C2_At4g16580 SL2.40ch12 62658020 0.0 ch12 81.122
CD2 SL2.40ch12 65226329 1e-116 ch12 120.376
cLEG-24-B23 SL2.40ch12 45586405 9e-76 ch12 60.872
cLET8G15 SL2.40ch12 44610144 1e-170 ch12 60.491
cLPT-1-F6 SL2.40ch12 45440254 3e-66 ch12 60.367
cLPT-6-E9 SL2.40ch12 559601 0.0 ch12 12.168
CT211 SL2.40ch12 2921920 1e-137 ch12 39.512
cTOA-22-C23 SL2.40ch12 64801744 4e-84 ch12 114.281
cTOF31A1 SL2.40ch12 63237909 2e-95 ch12 94.868
P64 SL2.40ch12 61777822 1e-139 ch12 74.464
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1993


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