Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch12

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1993


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
2157_859 SL2.40ch12 5869839 0.0
21604_305 SL2.40ch12 177485 0.0
21773_618 SL2.40ch12 8580086 0.0
21773_686 SL2.40ch12 8580086 0.0
21773_714 SL2.40ch12 8580086 0.0
2230_214 SL2.40ch12 2300963 0.0
2559_638 SL2.40ch12 65385179 0.0 ch12 133.571
2583_1013 SL2.40ch12 47842785 1e-173
2583_221 SL2.40ch12 47842785 1e-173 ch12 71.801
2583_872 SL2.40ch12 47842785 1e-173
2624_367 SL2.40ch12 47552661 1e-146 ch12 96.904 ch12 68.796
2624_516 SL2.40ch12 47552661 1e-146
2650_339 SL2.40ch12 64776737 0.0
27226_432 SL2.40ch12 64331555 0.0 ch12 124.779
27226_451 SL2.40ch12 64331555 0.0
2772_553 SL2.40ch12 2189695 0.0
2852_863 SL2.40ch12 65368006 0.0 ch12 133.571
2855_640 SL2.40ch12 5904739 0.0
2855_661 SL2.40ch12 5904739 0.0
2937_194 SL2.40ch12 40672064 1e-123 ch12 77.43
2939_95 SL2.40ch12 64901582 0.0 ch12 130.863 ch12 103.992
3231_206 SL2.40ch12 64598862 1e-161 ch12 127.135
3231_480 SL2.40ch12 64598862 1e-161
3231_703 SL2.40ch12 64598862 1e-161
331_191 SL2.40ch12 42568354 1e-158
331_221 SL2.40ch12 42568354 1e-158
331_335 SL2.40ch12 42568354 1e-158
331_374 SL2.40ch12 42568354 1e-158
3378_1174 SL2.40ch12 48484081 0.0
3378_1378 SL2.40ch12 48484081 0.0
3378_1435 SL2.40ch12 48484081 0.0
3459_300 SL2.40ch12 48218410 1e-167
3609_438 SL2.40ch12 44590821 0.0 ch12 57.18
3613_204 SL2.40ch12 3461182 0.0
3684_506 SL2.40ch12 47527374 0.0
3732_179 SL2.40ch12 48320412 1e-109
3732_221 SL2.40ch12 48320412 1e-109
3732_278 SL2.40ch12 48320412 1e-109 ch12 77.242
3766_408 SL2.40ch12 3536272 0.0
3901_591 SL2.40ch12 4598061 0.0 ch12 62.732 ch12 42.931
3937_1192 SL2.40ch12 22286049 0.0
3937_1843 SL2.40ch12 22286049 0.0 ch12 76.953
3951_1147 SL2.40ch12 64283953 0.0
3951_1162 SL2.40ch12 64283953 0.0
395_815 SL2.40ch12 44347022 1e-155 ch12 56.754
4013_338 SL2.40ch12 64528079 0.0
4069_523 SL2.40ch12 1688684 0.0
4075_727 SL2.40ch12 16041547 0.0
4212_585 SL2.40ch12 48175616 0.0
4212_771 SL2.40ch12 48175616 0.0 ch12 75.411
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1993


MarkerDB | Solanum lycopersicum