Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch12

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1993


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
14548_359 SL2.40ch12 1300264 0.0
1753_120 SL2.40ch12 1322735 0.0
TES6982 SL2.40ch12 1336745 1e-103
TES5900 SL2.40ch12 1341987 0.0
4489_957 SL2.40ch12 1349233 0.0
tme0054 SL2.40ch12 1349233 0.0 ch12 26.442
U216669 SL2.40ch12 1352542 0.0 ch12 24.461
TES2087 SL2.40ch12 1374670 0.0
TES1919 SL2.40ch12 1413220 0.0 ch12 18.245
11768_521 SL2.40ch12 1413656 0.0
TES4243 SL2.40ch12 1425888 3e-93
TES5079 SL2.40ch12 1438505 0.0
TES1566 SL2.40ch12 1446921 2e-91
TES4590 SL2.40ch12 1490823 0.0
TES0027 SL2.40ch12 1498919 1e-111 ch12 21.438 ch12 17.623
TES2923 SL2.40ch12 1513185 0.0
TES3203 SL2.40ch12 1513185 0.0
TGS3539 SL2.40ch12 1527413 0.0
TGS7461 SL2.40ch12 1536262 0.0
TES4245 SL2.40ch12 1536448 0.0
TES7265 SL2.40ch12 1549922 0.0
TES2977 SL2.40ch12 1550963 0.0
TES2238 SL2.40ch12 1555549 0.0
TES1515 SL2.40ch12 1567282 0.0 ch12 27.407
TGS6278 SL2.40ch12 1568910 0.0
TES2267 SL2.40ch12 1576496 1e-124
TES4601 SL2.40ch12 1629579 1e-153
TGS11941 SL2.40ch12 1629847 0.0
TGS0184 SL2.40ch12 1645470 0.0
TGS2885 SL2.40ch12 1663654 0.0 ch12 32.038
TGS11561 SL2.40ch12 1669415 0.0
TGS0931 SL2.40ch12 1674625 0.0
TGS3349 SL2.40ch12 1686400 0.0
4069_523 SL2.40ch12 1688684 0.0
TES7248 SL2.40ch12 1688704 1e-110
TES6509 SL2.40ch12 1694971 0.0
TES1420 SL2.40ch12 1759697 0.0 ch12 31.184
TES3959 SL2.40ch12 1802030 0.0
TGS5720 SL2.40ch12 1808369 0.0
TES1889 SL2.40ch12 1810633 0.0 ch12 30.509
9815_870 SL2.40ch12 1835055 0.0 ch12 21.256
TGS8197 SL2.40ch12 1841794 1e-151
TES5001 SL2.40ch12 1855670 0.0
TGS13147 SL2.40ch12 1873444 0.0
TGS1733 SL2.40ch12 1912809 0.0
TGS4749 SL2.40ch12 1923991 0.0
TGS3937 SL2.40ch12 1930581 0.0
TES2157 SL2.40ch12 1940313 0.0
TES0179 SL2.40ch12 1941412 0.0
TES6769 SL2.40ch12 1953068 0.0
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1993


MarkerDB | Solanum lycopersicum