Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch11

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1899


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)		 Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
7326_651 SL2.40ch11 42888573 0.0 ch02 22.933 ch02 0.0
TGS0423 SL2.40ch11 52518307 0.0 ch10 41.412
11289_715 SL2.40ch11 163032 0.0 ch11 2.379 ch11 0.0
1720_266 SL2.40ch11 291905 0.0 ch11 2.379 ch11 0.827
TES1394 SL2.40ch11 139088 0.0 ch11 0.335 ch11 2.915
9068_1249 SL2.40ch11 1184200 0.0 ch11 5.604 ch11 6.656
3033_96 SL2.40ch11 1360575 0.0 ch11 10.458 ch11 9.331
14579_646 SL2.40ch11 1335469 0.0 ch11 10.811 ch11 9.331
11749_235 SL2.40ch11 1345811 0.0 ch11 10.811 ch11 9.331
TGS3087 SL2.40ch11 1321755 0.0 ch11 11.019
TES1745 SL2.40ch11 3788375 0.0 ch11 29.455
TES0152 SL2.40ch11 4086875 0.0 ch11 42.323 ch11 32.414
TES0011 SL2.40ch11 4475350 0.0 ch11 49.457 ch11 36.392
9188_302 SL2.40ch11 4668341 1e-162 ch11 38.457 ch11 38.336
4390_731 SL2.40ch11 4806854 0.0 ch11 38.872 ch11 42.572
12180_227 SL2.40ch11 4776241 0.0 ch11 39.172 ch11 42.575
8404_587 SL2.40ch11 4800591 0.0 ch11 39.172 ch11 42.575
TGS0893 SL2.40ch11 48214940 0.0 ch11 40.555
3184_388 SL2.40ch11 4924538 0.0 ch11 41.749 ch11 42.575
TEI0909 SL2.40ch11 4938212 0.0 ch11 41.892
10722_814 SL2.40ch11 5005104 0.0 ch11 42.296 ch11 44.073
4267_148 SL2.40ch11 7659990 0.0 ch11 46.719
TES1039 SL2.40ch11 7554284 0.0 ch11 67.958 ch11 48.379
7544_1719 SL2.40ch11 8083342 0.0 ch11 50.901
2574_349 SL2.40ch11 8168344 0.0 ch11 51.593
11829_918 SL2.40ch11 8345939 0.0 ch11 52.112
16053_448 SL2.40ch11 8774781 0.0 ch11 53.71
TGS1000 SL2.40ch11 16879473 0.0 ch11 55.744
1977_988 SL2.40ch11 10015314 0.0 ch11 56.334
TGS0969 SL2.40ch11 12788115 0.0 ch11 56.741
TES1722 SL2.40ch11 10856113 0.0 ch11 67.274 ch11 56.745
6409_420 SL2.40ch11 11821574 0.0 ch11 56.745
20127_244 SL2.40ch11 12877930 0.0 ch11 56.745
TGS0285 SL2.40ch11 13429193 0.0 ch11 69.37 ch11 57.036
TGS0394 SL2.40ch11 18449459 0.0 ch11 57.045
TGS0522 SL2.40ch11 13859171 0.0 ch11 72.055 ch11 57.08
2874_1225 SL2.40ch11 14020622 0.0 ch11 57.131
7115_314 SL2.40ch11 19647532 0.0 ch11 57.131
3460_1383 SL2.40ch11 19661438 0.0 ch11 57.131
TGS0949 SL2.40ch11 23416881 0.0 ch11 67.352 ch11 57.131
TGS2757 SL2.40ch11 24486303 0.0 ch11 67.665 ch11 57.131
TGS0995 SL2.40ch11 29213476 0.0 ch11 57.131
17597_201 SL2.40ch11 30694463 1e-117 ch11 57.131
6310_515 SL2.40ch11 34947144 0.0 ch11 57.131
10293_1335 SL2.40ch11 35951929 0.0 ch11 57.131
7060_1003 SL2.40ch11 36680402 0.0 ch11 57.131
8154_997 SL2.40ch11 36898575 0.0 ch11 57.131
4413_614 SL2.40ch11 46018521 0.0 ch11 57.131
TGS1476 SL2.40ch11 29854252 0.0 ch11 80.134 ch11 57.14
TGS0187 SL2.40ch11 24491875 0.0 ch11 69.611 ch11 57.403
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1899

MarkerDB | Solanum lycopersicum