Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch11

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1899


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
9674_425 SL2.40ch11 52005764 0.0
9674_445 SL2.40ch11 52005764 0.0
9674_459 SL2.40ch11 52005764 0.0
9723_184 SL2.40ch11 36887058 0.0
9754_343 SL2.40ch11 1810186 0.0
9775_1108 SL2.40ch11 51993572 0.0
9775_1251 SL2.40ch11 51993572 0.0
9775_1267 SL2.40ch11 51993572 0.0
9775_1458 SL2.40ch11 51993572 0.0
9775_1499 SL2.40ch11 51993572 0.0
9775_1520 SL2.40ch11 51993572 0.0
9775_1597 SL2.40ch11 51993572 0.0
9775_1914 SL2.40ch11 51993572 0.0
9775_2007 SL2.40ch11 51993572 0.0
9775_2019 SL2.40ch11 51993572 0.0
9775_2058 SL2.40ch11 51993572 0.0
9775_2121 SL2.40ch11 51993572 0.0
9775_3995 SL2.40ch11 51993572 0.0
9895_186 SL2.40ch11 53333739 0.0
9895_211 SL2.40ch11 53333739 0.0
9895_282 SL2.40ch11 53333739 0.0
9895_294 SL2.40ch11 53333739 0.0
9895_525 SL2.40ch11 53333739 0.0
9895_564 SL2.40ch11 53333739 0.0
9895_585 SL2.40ch11 53333739 0.0
9895_606 SL2.40ch11 53333739 0.0
9895_653 SL2.40ch11 53333739 0.0
9895_679 SL2.40ch11 53333739 0.0
9895_696 SL2.40ch11 53333739 0.0
991_284 SL2.40ch11 1295965 0.0
991_318 SL2.40ch11 1295965 0.0
991_344 SL2.40ch11 1295965 0.0
9923_667 SL2.40ch11 35379702 1e-119
9963_327 SL2.40ch11 52457121 0.0 ch11 108.762 ch11 108.459
C2_At3g44880 SL2.40ch11 49288206 0.0 ch11 79.197
C2_At4g01560 SL2.40ch11 49092594 0.0 ch11 78.039
C2_At4g08230 SL2.40ch11 5955223 0.0 ch11 61.859
cLET-10-O11 SL2.40ch11 50501250 1e-138 ch11 91.259
cLEX-14-M4 SL2.40ch11 50553317 0.0 ch09 53.119
cLEX-4-G10 SL2.40ch11 7301873 0.0 ch11 68.005
CT182 SL2.40ch11 4912638 1e-106 ch11 50.682
CT269 SL2.40ch11 1149693 1e-158 ch11 14.408
cTOA-5-G7 SL2.40ch11 649840 3e-94 ch11 6.529
cTOE-14-L16 SL2.40ch11 48882490 1e-145 ch11 74.792
P47 SL2.40ch11 107828 1e-114 ch11 0.0
SSR136 SL2.40ch11 1865801 0.0 ch11 25.599
SSR46 SL2.40ch11 5459843 1e-108 ch11 60.644
T1014 SL2.40ch11 49863941 1e-102 ch11 83.063
T1071 SL2.40ch11 49446274 0.0 ch11 77.547
T1125 SL2.40ch11 2820254 0.0 ch11 34.286
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1899


MarkerDB | Solanum lycopersicum