Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch11

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1899


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
5317_467 SL2.40ch11 296579 1e-176
5324_300 SL2.40ch11 61225 2e-90
5329_182 SL2.40ch11 51607847 0.0
5329_518 SL2.40ch11 51607847 0.0
540_780 SL2.40ch11 3274609 0.0
5664_694 SL2.40ch11 52635420 0.0 ch11 110.688 ch11 109.68
5664_937 SL2.40ch11 52635420 0.0
5926_1326 SL2.40ch11 52955372 1e-151
5937_694 SL2.40ch11 4201541 0.0
5972_1026 SL2.40ch11 53131916 0.0 ch11 117.219 ch11 114.358
6013_26 SL2.40ch11 47499874 0.0
6130_538 SL2.40ch11 450408 0.0
6137_430 SL2.40ch11 46591623 0.0 ch11 57.939 ch11 56.712
6156_249 SL2.40ch11 16479531 0.0
6156_448 SL2.40ch11 16479531 0.0
6180_62 SL2.40ch11 3828751 0.0
6223_185 SL2.40ch11 52174526 0.0
6223_2006 SL2.40ch11 52174526 0.0
6223_445 SL2.40ch11 52174526 0.0
6223_482 SL2.40ch11 52174526 0.0
6310_515 SL2.40ch11 34947144 0.0 ch11 57.131
6373_321 SL2.40ch11 1909712 0.0
6409_286 SL2.40ch11 11821574 0.0
6409_332 SL2.40ch11 11821574 0.0
6409_420 SL2.40ch11 11821574 0.0 ch11 56.745
657_519 SL2.40ch11 2807315 0.0
6820_1743 SL2.40ch11 28096407 0.0
6820_1818 SL2.40ch11 28096407 0.0
6991_42 SL2.40ch11 35060609 0.0
7053_296 SL2.40ch11 51827689 1e-161
7060_1003 SL2.40ch11 36680402 0.0 ch11 57.131
7060_1111 SL2.40ch11 36680402 0.0
7113_107 SL2.40ch11 52572616 0.0 ch11 110.212 ch11 109.68
7113_392 SL2.40ch11 52572616 0.0
7115_1202 SL2.40ch11 19647532 0.0
7115_1227 SL2.40ch11 19647532 0.0
7115_314 SL2.40ch11 19647532 0.0 ch11 57.131
7115_398 SL2.40ch11 19647532 0.0
7326_651 SL2.40ch11 42888573 0.0 ch02 22.933 ch02 0.0
7348_383 SL2.40ch11 52992079 0.0
7539_330 SL2.40ch11 47083999 0.0
7544_1719 SL2.40ch11 8083342 0.0 ch11 50.901
7544_1780 SL2.40ch11 8083342 0.0
7573_774 SL2.40ch11 3640760 1e-155
7598_273 SL2.40ch11 705155 0.0
7611_1050 SL2.40ch11 47268322 0.0
7614_642 SL2.40ch11 1178474 1e-154
7614_659 SL2.40ch11 1178474 1e-154
7677_2000 SL2.40ch11 1533998 0.0
7827_1091 SL2.40ch11 52611661 0.0 ch11 110.688 ch11 109.69
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1899


MarkerDB | Solanum lycopersicum