Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch09

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 2615


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)		 Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
8762_134 SL2.40ch09 36707602 0.0 ch02 45.287
13624_1696 SL2.40ch09 224502 0.0 ch09 0.14 ch09 0.0
9441_202 SL2.40ch09 240041 0.0 ch09 0.0
3305_424 SL2.40ch09 404721 1e-175 ch09 0.516 ch09 0.0
3642_288 SL2.40ch09 557888 0.0 ch09 0.516 ch09 1.185
11252_730 SL2.40ch09 573151 0.0 ch09 0.95 ch09 1.185
7713_333 SL2.40ch09 596999 0.0 ch09 1.374 ch09 1.185
7195_279 SL2.40ch09 636025 0.0 ch09 1.374 ch09 2.279
5530_955 SL2.40ch09 672892 0.0 ch09 2.693 ch09 2.671
3907_323 SL2.40ch09 750222 0.0 ch09 3.999 ch09 3.852
6132_106 SL2.40ch09 732712 0.0 ch09 3.561 ch09 3.857
17396_343 SL2.40ch09 986327 0.0 ch09 5.461
10470_489 SL2.40ch09 1218094 0.0 ch09 6.798
2086_272 SL2.40ch09 1315347 0.0 ch09 8.527
14109_151 SL2.40ch09 2052389 0.0 ch09 18.479 ch09 14.39
14488_107 SL2.40ch09 4499874 0.0 ch09 42.122
10398_1363 SL2.40ch09 62198594 0.0 ch09 80.074 ch09 71.906
11941_371 SL2.40ch09 61874496 0.0 ch09 78.331 ch09 73.536
7786_877 SL2.40ch09 3456958 0.0 ch09 81.766 ch09 73.951
14202_293 SL2.40ch09 62050403 0.0 ch09 81.766 ch09 73.951
16992_614 SL2.40ch09 62168043 0.0 ch09 82.438 ch09 74.331
19855_189 SL2.40ch09 62168313 0.0 ch09 82.438 ch09 74.331
6975_370 SL2.40ch09 62196880 0.0 ch09 82.903 ch09 74.331
13967_273 SL2.40ch09 62211661 0.0 ch09 82.903 ch09 74.331
2910_509 SL2.40ch09 62330280 0.0 ch09 83.472 ch09 76.383
6056_199 SL2.40ch09 62393269 0.0 ch09 84.387 ch09 77.209
12132_1092 SL2.40ch09 62435822 0.0 ch09 84.86 ch09 77.209
3296_189 SL2.40ch09 62470982 0.0 ch09 84.86 ch09 77.616
16740_117 SL2.40ch09 62511376 0.0 ch09 85.332 ch09 77.616
4492_522 SL2.40ch09 62542914 0.0 ch09 85.796 ch09 77.616
7956_1674 SL2.40ch09 62645430 0.0 ch09 87.511 ch09 78.442
7271_166 SL2.40ch09 62719192 0.0 ch09 87.991 ch09 78.442
6744_216 SL2.40ch09 62766320 0.0 ch09 88.356 ch09 78.442
6300_1828 SL2.40ch09 62799681 0.0 ch09 89.226 ch09 78.84
12855_531 SL2.40ch09 62885938 1e-180 ch09 89.703 ch09 79.679
3843_982 SL2.40ch09 63079390 0.0 ch09 92.395 ch09 80.951
7672_674 SL2.40ch09 63185431 0.0 ch09 94.534 ch09 82.707
3386_470 SL2.40ch09 63375291 0.0 ch09 96.718 ch09 84.498
6358_371 SL2.40ch09 63583808 0.0 ch09 99.198 ch09 85.856
4322_561 SL2.40ch09 63657273 1e-146 ch09 100.281 ch09 86.708
15644_1130 SL2.40ch09 63665503 1e-163 ch09 100.281 ch09 86.708
9620_116 SL2.40ch09 63669855 0.0 ch09 100.281 ch09 86.708
17180_282 SL2.40ch09 63646423 0.0 ch09 100.281 ch09 86.828
10061_346 SL2.40ch09 63802222 1e-134 ch09 102.942 ch09 88.827
10965_182 SL2.40ch09 63847961 1e-146 ch09 104.136 ch09 88.827
9947_125 SL2.40ch09 64103027 0.0 ch09 110.146 ch09 91.938
11751_286 SL2.40ch09 64132427 0.0 ch09 110.146 ch09 92.835
4845_622 SL2.40ch09 64206968 1e-169 ch09 110.537 ch09 93.417
11485_183 SL2.40ch09 63818080 1e-114 ch09 103.278 ch09 104.761
1336_974 SL2.40ch09 67441294 1e-140 ch09 121.25 ch09 116.754
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 2615

MarkerDB | Solanum lycopersicum