Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch08

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1958


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
10489_192 SL2.40ch08 560085 0.0 ch08 0.0 ch08 0.0
18065_277 SL2.40ch08 586095 0.0 ch08 0.43 ch08 0.0
122_650 SL2.40ch08 602234 0.0 ch08 0.43 ch08 0.0
TES1642 SL2.40ch08 698354 1e-124 ch08 1.288
4245_155 SL2.40ch08 754048 0.0 ch08 2.144 ch08 3.625
2404_427 SL2.40ch08 764301 0.0 ch08 2.144 ch08 3.625
10651_505 SL2.40ch08 849846 0.0 ch08 3.012 ch08 3.211
5986_549 SL2.40ch08 3680941 0.0 ch08 49.594 ch08 24.916
TES0065 SL2.40ch08 21983668 0.0 ch08 24.385 ch08 51.907
TGS0665 SL2.40ch08 21984776 0.0 ch08 54.981
TGS0559 SL2.40ch08 10212498 0.0 ch08 24.147 ch08 55.214
TES0475 SL2.40ch08 48058495 0.0 ch08 55.731
TGS0769 SL2.40ch08 51086125 0.0 ch08 36.151 ch08 59.196
TGS0354 SL2.40ch08 51279100 0.0 ch08 30.648 ch08 60.727
6362_838 SL2.40ch08 51581338 0.0 ch08 62.664 ch08 32.474
16132_227 SL2.40ch08 51647626 0.0 ch08 63.135 ch08 32.815
57_214 SL2.40ch08 51933292 0.0 ch08 64.228 ch08 34.18
TES1350 SL2.40ch08 51730257 0.0 ch08 32.072 ch08 67.074
7506_614 SL2.40ch08 53583844 0.0 ch08 69.457 ch08 39.561
14868_481 SL2.40ch08 56476003 0.0 ch08 86.586 ch08 53.378
7609_392 SL2.40ch08 56827946 0.0 ch08 89.736 ch08 55.531
6104_991 SL2.40ch08 56839854 0.0 ch08 89.736 ch08 55.531
17829_618 SL2.40ch08 57230872 0.0 ch08 95.386 ch08 59.237
TES1077 SL2.40ch08 57769176 0.0 ch08 60.788 ch08 97.743
2452_813 SL2.40ch08 57977651 0.0 ch08 99.049 ch08 65.664
3538_583 SL2.40ch08 58035802 0.0 ch08 99.511 ch08 66.978
7509_650 SL2.40ch08 59436694 0.0 ch08 107.372
3194_739 SL2.40ch08 59745824 0.0 ch08 108.942
17673_299 SL2.40ch08 59780777 0.0 ch08 108.942
TGS0891 SL2.40ch08 59919449 0.0 ch08 112.178
18512_475 SL2.40ch08 61402405 0.0 ch08 122.518 ch08 86.039
12830_271 SL2.40ch08 61596930 0.0 ch08 124.029 ch08 88.162
TGS0563 SL2.40ch08 49406407 1e-164 ch11 116.102
TES0668 SL2.40ch08 24476 0.0
TES2323 SL2.40ch08 24476 0.0
TES2050 SL2.40ch08 24480 0.0
TES2226 SL2.40ch08 34367 0.0
8062_285 SL2.40ch08 35423 0.0
15653_318 SL2.40ch08 51135 0.0
cLEN9M1 SL2.40ch08 53348 1e-142 ch08 2.763
TGS10569 SL2.40ch08 73837 0.0
TGS12076 SL2.40ch08 75369 0.0
TES2549 SL2.40ch08 78374 1e-149
TGS2862 SL2.40ch08 86363 0.0
TGS8983 SL2.40ch08 88953 0.0
TGS1246 SL2.40ch08 94213 0.0
cLEF51A13 SL2.40ch08 96826 1e-110 ch08 2.871
TGS9974 SL2.40ch08 106498 0.0
TES3266 SL2.40ch08 116833 0.0
TES0905 SL2.40ch08 129946 0.0
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1958


MarkerDB | Solanum lycopersicum