Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch05

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1956


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
TES2009 SL2.40ch05 4163904 0.0 ch05 0.0
5768_1347 SL2.40ch05 4147968 0.0 ch05 0.11
13365_1123 SL2.40ch05 4159588 0.0 ch05 0.11
13841_161 SL2.40ch05 4190115 0.0 ch05 0.11
TES0626 SL2.40ch05 4524946 0.0 ch05 1.675
7699_1396 SL2.40ch05 4442246 0.0 ch05 3.183 ch05 6.586
11239_490 SL2.40ch05 4467984 0.0 ch05 3.183 ch05 6.586
3173_646 SL2.40ch05 4989560 0.0 ch05 5.652 ch05 11.589
12619_399 SL2.40ch05 4990025 0.0 ch05 5.652 ch05 11.589
7913_1495 SL2.40ch05 5269597 0.0 ch05 6.946 ch05 16.03
5920_688 SL2.40ch05 5155345 1e-179 ch05 7.034 ch05 12.579
10897_342 SL2.40ch05 5312151 0.0 ch05 7.996 ch05 16.03
10727_352 SL2.40ch05 5465885 0.0 ch05 8.551 ch05 16.512
TGS3224 SL2.40ch05 6306611 0.0 ch05 73.38 ch05 12.243
7138_174 SL2.40ch05 5638083 0.0 ch05 13.761 ch05 17.962
12600_152 SL2.40ch05 5651884 0.0 ch05 14.089 ch05 17.962
15864_257 SL2.40ch05 5846036 0.0 ch05 15.682 ch05 22.394
6740_285 SL2.40ch05 5788083 0.0 ch05 16.327 ch05 20.391
10711_364 SL2.40ch05 5890908 0.0 ch05 16.327 ch05 22.775
3718_629 SL2.40ch05 6280835 0.0 ch05 19.551 ch05 24.097
11729_478 SL2.40ch05 6404712 0.0 ch05 19.551 ch05 24.976
TGS0307 SL2.40ch05 6348584 0.0 ch05 19.571
10411_880 SL2.40ch05 6126287 0.0 ch05 19.579 ch05 24.08
3252_247 SL2.40ch05 6171145 0.0 ch05 19.579 ch05 24.08
2932_315 SL2.40ch05 6226972 0.0 ch05 19.579 ch05 24.08
8447_108 SL2.40ch05 6388489 0.0 ch05 19.579 ch05 24.956
13200_233 SL2.40ch05 6571646 0.0 ch05 22.552 ch05 25.371
TES1649 SL2.40ch05 61085611 1e-114 ch05 24.603
5890_630 SL2.40ch05 6848870 0.0 ch05 26.846 ch05 27.15
1504_282 SL2.40ch05 6934300 0.0 ch05 29.138 ch05 27.558
TES1354 SL2.40ch05 6944455 0.0 ch05 29.601
18191_196 SL2.40ch05 6944423 0.0 ch05 29.604 ch05 27.59
2276_805 SL2.40ch05 6986130 0.0 ch05 31.266 ch05 27.999
21703_309 SL2.40ch05 7013390 0.0 ch05 31.266 ch05 28.48
5578_297 SL2.40ch05 7051692 0.0 ch05 32.345 ch05 28.404
9599_1443 SL2.40ch05 7059122 0.0 ch05 32.345 ch05 28.404
12080_1090 SL2.40ch05 7066238 0.0 ch05 32.345 ch05 28.47
TES0188 SL2.40ch05 7535129 0.0 ch05 81.945 ch05 34.667
TEI0063 SL2.40ch05 7503250 0.0 ch05 81.616 ch05 34.911
6576_179 SL2.40ch05 7494865 0.0 ch05 34.957 ch05 30.213
4441_209 SL2.40ch05 7616734 0.0 ch05 34.957 ch05 30.542
7166_427 SL2.40ch05 7818051 0.0 ch05 34.957 ch05 30.662
TGS0443 SL2.40ch05 56404794 0.0 ch05 83.57 ch05 37.618
TGS0070 SL2.40ch05 21164089 0.0 ch05 79.532 ch05 38.214
TES0229 SL2.40ch05 8827137 1e-161 ch05 38.736
15118_762 SL2.40ch05 58170292 0.0 ch05 39.252 ch05 34.315
TGS0038 SL2.40ch05 18794765 0.0 ch05 67.08 ch05 39.592
TGS0863 SL2.40ch05 36627445 0.0 ch05 39.682
TGS0595 SL2.40ch05 9164975 0.0 ch05 81.627 ch05 39.883
TGS0504 SL2.40ch05 51036841 0.0 ch05 81.405 ch05 39.965
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1956


MarkerDB | Solanum lycopersicum