Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch05

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1956


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
TES1577 SL2.40ch05 4883567 0.0
TGS12696 SL2.40ch05 4974847 0.0
TGS9228 SL2.40ch05 4988784 0.0
3173_1663 SL2.40ch05 4989560 0.0
3173_493 SL2.40ch05 4989560 0.0
3173_646 SL2.40ch05 4989560 0.0 ch05 5.652 ch05 11.589
3173_853 SL2.40ch05 4989560 0.0
12619_185 SL2.40ch05 4990025 0.0
12619_399 SL2.40ch05 4990025 0.0 ch05 5.652 ch05 11.589
TEI0467 SL2.40ch05 4990025 0.0 ch05 65.77
TGS1499 SL2.40ch05 4990695 0.0 ch05 63.975
TGS6638 SL2.40ch05 5043366 0.0
TES5093 SL2.40ch05 5045006 1e-110
TGS8296 SL2.40ch05 5058727 0.0
TES1730 SL2.40ch05 5063523 0.0
TGS5221 SL2.40ch05 5086770 0.0
TGS5541 SL2.40ch05 5116482 0.0
TGS9661 SL2.40ch05 5154520 0.0
5920_688 SL2.40ch05 5155345 1e-179 ch05 7.034 ch05 12.579
TGS12540 SL2.40ch05 5171475 0.0
TES1038 SL2.40ch05 5192621 0.0
TES3439 SL2.40ch05 5198455 0.0
TGS9906 SL2.40ch05 5230548 0.0
TES1230 SL2.40ch05 5230849 1e-175 ch05 69.729
TGS4120 SL2.40ch05 5240348 0.0
7913_1495 SL2.40ch05 5269597 0.0 ch05 6.946 ch05 16.03
TGS3952 SL2.40ch05 5295400 0.0
TES6864 SL2.40ch05 5295698 0.0
TGS4745 SL2.40ch05 5306626 0.0
10897_342 SL2.40ch05 5312151 0.0 ch05 7.996 ch05 16.03
cLET-7-N9 SL2.40ch05 5318901 1e-113 ch05 69.0
TES1820 SL2.40ch05 5332207 1e-117
8423_970 SL2.40ch05 5341541 0.0
TES0097 SL2.40ch05 5343307 0.0
11884_652 SL2.40ch05 5355538 0.0
11884_700 SL2.40ch05 5355538 0.0
TGS4240 SL2.40ch05 5378714 0.0
TGS10222 SL2.40ch05 5422794 1e-122
10115_1495 SL2.40ch05 5465657 0.0
10115_1714 SL2.40ch05 5465657 0.0
10727_352 SL2.40ch05 5465885 0.0 ch05 8.551 ch05 16.512
TGS8056 SL2.40ch05 5476277 0.0
TGS2053 SL2.40ch05 5476569 0.0
TES3570 SL2.40ch05 5500808 1e-161
TGS9724 SL2.40ch05 5502574 0.0
TGS10057 SL2.40ch05 5504211 0.0
TES0018 SL2.40ch05 5547327 0.0 ch07 46.643 ch07 59.048
TGS3020 SL2.40ch05 5567721 0.0
5145_1594 SL2.40ch05 5575212 0.0
TGS0889 SL2.40ch05 5588212 0.0
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1956


MarkerDB | Solanum lycopersicum