Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch04

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 2652


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
288_329 SL2.40ch04 7143745 0.0 ch02 48.213
7466_129 SL2.40ch04 846093 0.0 ch04 0.0
16874_1222 SL2.40ch04 745342 0.0 ch04 10.52
50_878 SL2.40ch04 1459013 0.0 ch04 15.414
6388_144 SL2.40ch04 2694893 0.0 ch04 0.0 ch04 23.86
6807_1198 SL2.40ch04 3072390 0.0 ch04 1.77 ch04 26.64
8565_132 SL2.40ch04 4119041 0.0 ch04 35.289
6643_445 SL2.40ch04 4831847 0.0 ch04 40.908
15200_930 SL2.40ch04 9609394 0.0 ch04 44.854 ch04 47.563
2325_361 SL2.40ch04 7791089 0.0 ch04 37.911 ch04 48.583
12796_331 SL2.40ch04 51709606 0.0 ch04 42.252 ch04 55.501
4500_470 SL2.40ch04 51718796 0.0 ch04 42.252 ch04 55.501
6855_553 SL2.40ch04 54197647 0.0 ch04 67.547
16400_948 SL2.40ch04 54328898 4e-83 ch04 67.547
8224_219 SL2.40ch04 54348833 0.0 ch04 67.547
8014_227 SL2.40ch04 54195311 0.0 ch04 67.57
11029_377 SL2.40ch04 54248183 0.0 ch04 67.57
3009_696 SL2.40ch04 54469356 0.0 ch04 67.57
7800_425 SL2.40ch04 54489996 0.0 ch04 67.941
6436_497 SL2.40ch04 54754436 0.0 ch04 67.941
5739_249 SL2.40ch04 54581015 1e-180 ch04 67.961
6166_395 SL2.40ch04 54592468 1e-172 ch04 67.961
2113_439 SL2.40ch04 54636701 0.0 ch04 67.961
5363_450 SL2.40ch04 54731130 0.0 ch04 67.972
15493_661 SL2.40ch04 54869871 0.0 ch04 68.319
11044_868 SL2.40ch04 55101173 0.0 ch04 68.319
3384_932 SL2.40ch04 54941969 0.0 ch04 68.35
10821_290 SL2.40ch04 54942892 0.0 ch04 69.001
4199_1031 SL2.40ch04 55477144 0.0 ch04 69.591
16417_117 SL2.40ch04 57713159 0.0 ch04 86.464
7318_1627 SL2.40ch04 57863497 0.0 ch04 86.464
13273_52 SL2.40ch04 58025858 1e-167 ch04 88.095
7121_297 SL2.40ch04 59393244 0.0 ch04 101.005 ch04 98.025
4934_246 SL2.40ch04 61684218 0.0 ch04 112.829 ch04 104.583
3512_276 SL2.40ch04 60978601 0.0 ch04 108.989 ch04 112.026
15725_183 SL2.40ch04 60984388 0.0 ch04 108.989 ch04 112.026
16154_461 SL2.40ch04 61041800 1e-144 ch04 109.466 ch04 112.026
10154_1245 SL2.40ch04 61069585 0.0 ch04 109.966 ch04 112.026
17480_735 SL2.40ch04 61070528 1e-162 ch04 109.966 ch04 112.026
19499_427 SL2.40ch04 61091406 0.0 ch04 109.966 ch04 112.026
18930_394 SL2.40ch04 61094419 0.0 ch04 109.966 ch04 112.026
14088_399 SL2.40ch04 61130850 1e-139 ch04 109.966 ch04 112.026
5425_319 SL2.40ch04 61178521 0.0 ch04 110.447 ch04 112.026
22991_651 SL2.40ch04 61188535 0.0 ch04 110.447 ch04 112.026
10725_140 SL2.40ch04 61190750 0.0 ch04 110.493 ch04 112.026
7918_983 SL2.40ch04 61240514 7e-76 ch04 110.447 ch04 112.026
9626_577 SL2.40ch04 61249763 1e-75 ch04 111.598 ch04 112.026
12900_1024 SL2.40ch04 61303441 1e-177 ch04 111.417 ch04 112.026
12642_252 SL2.40ch04 61324418 0.0 ch04 111.417 ch04 112.026
750_348 SL2.40ch04 61335417 1e-171 ch04 111.417 ch04 112.026
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 2652


MarkerDB | Solanum lycopersicum