Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch04

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 2652


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
6388_144 SL2.40ch04 2694893 0.0 ch04 0.0 ch04 23.86
6807_1198 SL2.40ch04 3072390 0.0 ch04 1.77 ch04 26.64
TGS2383 SL2.40ch04 58755161 0.0 ch04 23.081
TGS0664 SL2.40ch04 14526115 0.0 ch04 30.728
TGS0407 SL2.40ch04 17268966 0.0 ch04 32.886 ch04 34.833
TGS0616 SL2.40ch04 44352277 0.0 ch04 37.125
TGS0411 SL2.40ch04 17497139 0.0 ch04 18.275 ch04 37.643
15462_1233 SL2.40ch04 7771818 0.0 ch04 37.911
2325_361 SL2.40ch04 7791089 0.0 ch04 37.911 ch04 48.583
TGS1791 SL2.40ch04 8819342 0.0 ch04 37.079 ch04 37.911
18784_301 SL2.40ch04 9492735 0.0 ch04 37.911
TGS0580 SL2.40ch04 40674322 0.0 ch04 38.022 ch04 37.911
TES0710 SL2.40ch04 9635976 1e-136 ch04 35.897 ch04 38.214
TGS0150 SL2.40ch04 32874359 0.0 ch04 38.561
12796_331 SL2.40ch04 51709606 0.0 ch04 42.252 ch04 55.501
4500_470 SL2.40ch04 51718796 0.0 ch04 42.252 ch04 55.501
15200_930 SL2.40ch04 9609394 0.0 ch04 44.854 ch04 47.563
TES0096 SL2.40ch04 60534724 2e-52 ch04 84.566
TGS1849 SL2.40ch04 58670130 0.0 ch04 96.598
10602_645 SL2.40ch04 58082091 0.0 ch04 97.06
12621_316 SL2.40ch04 58090568 1e-121 ch04 97.06
TES1809 SL2.40ch04 58123736 0.0 ch04 65.328 ch04 97.06
TGS0292 SL2.40ch04 58211362 0.0 ch04 65.431 ch04 97.484
TES1180 SL2.40ch04 58194360 0.0 ch04 65.089 ch04 97.528
1483_858 SL2.40ch04 58211456 0.0 ch04 97.528
13218_336 SL2.40ch04 58264398 0.0 ch04 97.528
TES0180 SL2.40ch04 58433376 1e-108 ch04 68.724 ch04 98.175
TES1287 SL2.40ch04 58337257 0.0 ch04 98.5
9201_263 SL2.40ch04 58399776 0.0 ch04 98.539
21063_66 SL2.40ch04 58453655 0.0 ch04 99.014
5249_468 SL2.40ch04 58454543 0.0 ch04 99.014
7025_760 SL2.40ch04 58456542 0.0 ch04 99.014
10513_176 SL2.40ch04 58536404 0.0 ch04 99.014
7778_810 SL2.40ch04 58567317 0.0 ch04 99.014
3740_517 SL2.40ch04 58568026 0.0 ch04 99.014
4687_353 SL2.40ch04 58662350 0.0 ch04 99.014
TES0722 SL2.40ch04 58790305 0.0 ch04 71.537 ch04 99.518
3980_351 SL2.40ch04 58850457 0.0 ch04 99.982
8596_434 SL2.40ch04 58919363 0.0 ch04 100.476
4513_2013 SL2.40ch04 59099551 0.0 ch04 100.476
17290_573 SL2.40ch04 59101866 0.0 ch04 100.476
2838_621 SL2.40ch04 59152241 0.0 ch04 100.476
TES1927 SL2.40ch04 59279258 0.0 ch04 76.265 ch04 100.476
4667_1362 SL2.40ch04 59279269 0.0 ch04 100.476
2826_171 SL2.40ch04 59291291 0.0 ch04 100.476
935_1052 SL2.40ch04 59358327 0.0 ch04 100.476
TES0582 SL2.40ch04 59013416 0.0 ch04 74.28 ch04 100.89
7121_297 SL2.40ch04 59393244 0.0 ch04 101.005 ch04 98.025
TES0087 SL2.40ch04 59487833 2e-57 ch04 77.046 ch04 101.005
TEI0421 SL2.40ch04 59413655 1e-165 ch04 101.372
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 2652


MarkerDB | Solanum lycopersicum