Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch04

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 2652


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
SSR92 SL2.40ch04 55610085 8e-95 ch01 4.384
CD59 SL2.40ch04 1354725 0.0 ch04 0.0
TES0161 SL2.40ch04 1589469 0.0 ch04 1.766
TES0030 SL2.40ch04 1207159 0.0 ch04 2.258
TEI0494 SL2.40ch04 1237519 0.0 ch04 3.071
TGS0899 SL2.40ch04 1600256 0.0 ch04 4.687
TG15 SL2.40ch04 1686684 0.0 ch04 6.403
TES0619 SL2.40ch04 2019527 7e-45 ch04 8.627
CT229 SL2.40ch04 1956859 1e-85 ch04 9.377
TES0826 SL2.40ch04 1974180 1e-162 ch04 10.022
SSR43 SL2.40ch04 2127725 0.0 ch04 11.684
TES1741 SL2.40ch04 2283549 0.0 ch04 12.77
T506 SL2.40ch04 2199981 0.0 ch04 13.956
TEI0670 SL2.40ch04 2400379 0.0 ch04 14.759
T208 SL2.40ch04 2414403 0.0 ch04 15.711
cLET5G20 SL2.40ch04 2419839 0.0 ch04 15.711
T741 SL2.40ch04 2804471 1e-155 ch04 16.474
TGS0411 SL2.40ch04 17497139 0.0 ch04 18.275 ch04 37.643
TES1023 SL2.40ch04 2955932 1e-126 ch04 19.886
TGS0778 SL2.40ch04 3310976 0.0 ch04 21.139
TEI0645 SL2.40ch04 3280099 0.0 ch04 21.421
TGS2046 SL2.40ch04 3620983 0.0 ch04 21.844
TGS2802 SL2.40ch04 3289048 0.0 ch04 22.523
TES0294 SL2.40ch04 3883581 0.0 ch04 22.828
T703 SL2.40ch04 3966879 1e-104 ch04 23.737
TES0968 SL2.40ch04 4203380 0.0 ch04 24.48
TES1955 SL2.40ch04 3536559 1e-172 ch04 25.439
T1068 SL2.40ch04 4386990 1e-80 ch04 26.353
TES0177 SL2.40ch04 4561980 0.0 ch04 27.946
TES1141 SL2.40ch04 4960812 0.0 ch04 29.566
TGS2379 SL2.40ch04 10719517 0.0 ch04 31.331
TGS1027 SL2.40ch04 18068988 0.0 ch04 32.339
TGS0407 SL2.40ch04 17268966 0.0 ch04 32.886 ch04 34.833
TES0491 SL2.40ch04 5491361 0.0 ch04 33.782
TGS0283 SL2.40ch04 5731501 0.0 ch04 34.082
TGS1244 SL2.40ch04 44113879 0.0 ch04 34.564
TGS2910 SL2.40ch04 22399585 0.0 ch04 34.884
TGS2238 SL2.40ch04 39123692 0.0 ch04 35.416
tmb0140 SL2.40ch04 42390341 0.0 ch04 35.594
T635 SL2.40ch04 6035257 1e-158 ch04 35.778
TES0710 SL2.40ch04 9635976 1e-136 ch04 35.897 ch04 38.214
tma0271 SL2.40ch04 32406420 0.0 ch04 36.018
TGS2528 SL2.40ch04 44118655 0.0 ch04 36.242
tma0228 SL2.40ch04 31657868 0.0 ch04 36.494
tmb0019 SL2.40ch04 32325391 0.0 ch04 36.625
TGS2814 SL2.40ch04 14366140 0.0 ch04 36.679
tmc0041 SL2.40ch04 14098871 0.0 ch04 36.751
TGS1008 SL2.40ch04 42835605 0.0 ch04 36.865
tme0078 SL2.40ch04 41916287 0.0 ch04 36.968
tma0220 SL2.40ch04 14729247 0.0 ch04 37.002
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 2652


MarkerDB | Solanum lycopersicum