Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch04

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 2652


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)		 Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
9155_1003 SL2.40ch04 59461715 0.0 ch04 101.545
15968_699 SL2.40ch04 59499080 0.0 ch04 101.545
8211_2024 SL2.40ch04 59595953 0.0 ch04 101.929
TEI0050 SL2.40ch04 59585803 0.0 ch04 78.41 ch04 101.933
2664_69 SL2.40ch04 59671468 0.0 ch04 102.395
9711_63 SL2.40ch04 59674662 0.0 ch04 102.395
13272_162 SL2.40ch04 59743731 0.0 ch04 103.445
11457_543 SL2.40ch04 59838855 0.0 ch04 103.445
2706_199 SL2.40ch04 59949243 0.0 ch04 103.945
6186_2607 SL2.40ch04 59977850 0.0 ch04 103.945
7906_1512 SL2.40ch04 59978328 0.0 ch04 103.945
TES0098 SL2.40ch04 60219585 0.0 ch04 84.183 ch04 104.755
13290_203 SL2.40ch04 60115613 0.0 ch04 105.118
14698_193 SL2.40ch04 60124471 1e-127 ch04 105.118
1513_866 SL2.40ch04 60443280 0.0 ch04 106.397
16834_546 SL2.40ch04 60465261 0.0 ch04 106.397
15036_745 SL2.40ch04 60542000 0.0 ch04 107.504
5525_454 SL2.40ch04 60599204 0.0 ch04 107.504
14414_507 SL2.40ch04 60661699 0.0 ch04 107.504
7496_1258 SL2.40ch04 60665008 0.0 ch04 107.504
3721_372 SL2.40ch04 60724416 0.0 ch04 107.785
TGS2730 SL2.40ch04 60927691 1e-169 ch04 91.917 ch04 108.33
2845_252 SL2.40ch04 60876334 0.0 ch04 108.563
3512_276 SL2.40ch04 60978601 0.0 ch04 108.989 ch04 112.026
15725_183 SL2.40ch04 60984388 0.0 ch04 108.989 ch04 112.026
16154_461 SL2.40ch04 61041800 1e-144 ch04 109.466 ch04 112.026
10154_1245 SL2.40ch04 61069585 0.0 ch04 109.966 ch04 112.026
17480_735 SL2.40ch04 61070528 1e-162 ch04 109.966 ch04 112.026
19499_427 SL2.40ch04 61091406 0.0 ch04 109.966 ch04 112.026
18930_394 SL2.40ch04 61094419 0.0 ch04 109.966 ch04 112.026
14088_399 SL2.40ch04 61130850 1e-139 ch04 109.966 ch04 112.026
5425_319 SL2.40ch04 61178521 0.0 ch04 110.447 ch04 112.026
22991_651 SL2.40ch04 61188535 0.0 ch04 110.447 ch04 112.026
7918_983 SL2.40ch04 61240514 7e-76 ch04 110.447 ch04 112.026
10725_140 SL2.40ch04 61190750 0.0 ch04 110.493 ch04 112.026
TES0591 SL2.40ch04 61391558 0.0 ch04 111.069
12900_1024 SL2.40ch04 61303441 1e-177 ch04 111.417 ch04 112.026
12642_252 SL2.40ch04 61324418 0.0 ch04 111.417 ch04 112.026
750_348 SL2.40ch04 61335417 1e-171 ch04 111.417 ch04 112.026
8338_322 SL2.40ch04 61373850 1e-121 ch04 111.417 ch04 112.026
11551_242 SL2.40ch04 61377469 0.0 ch04 111.417 ch04 112.026
16619_356 SL2.40ch04 61497073 1e-101 ch04 111.417 ch04 112.026
9626_577 SL2.40ch04 61249763 1e-75 ch04 111.598 ch04 112.026
22867_650 SL2.40ch04 61556554 0.0 ch04 111.899 ch04 112.026
11979_362 SL2.40ch04 61564144 1e-179 ch04 111.899 ch04 112.026
10487_655 SL2.40ch04 61600512 0.0 ch04 112.309 ch04 112.026
17944_152 SL2.40ch04 61755759 1e-113 ch04 112.783 ch04 112.026
14912_523 SL2.40ch04 61776925 0.0 ch04 112.783 ch04 112.026
9103_254 SL2.40ch04 61625683 0.0 ch04 112.829 ch04 112.026
5560_1385 SL2.40ch04 61681316 0.0 ch04 112.829 ch04 112.026
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 2652

MarkerDB | Solanum lycopersicum