Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch03

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 2577


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
6069_886 SL2.40ch03 55997 9e-98 ch03 0.0 ch03 0.0
10431_124 SL2.40ch03 70647 0.0 ch03 0.0 ch03 0.0
3351_2089 SL2.40ch03 338638 0.0 ch03 0.451 ch03 0.0
5590_456 SL2.40ch03 772768 0.0 ch03 4.569 ch03 2.911
9794_911 SL2.40ch03 1190095 1e-130 ch03 6.849 ch03 5.667
4526_440 SL2.40ch03 2466144 0.0 ch03 19.127 ch03 17.882
8368_380 SL2.40ch03 2416706 0.0 ch03 18.634 ch03 18.006
11192_284 SL2.40ch03 6992623 0.0 ch03 19.997 ch03 18.655
3382_141 SL2.40ch03 7329164 0.0 ch03 28.137
9661_103 SL2.40ch03 7658059 0.0 ch03 32.877
13946_375 SL2.40ch03 11513213 1e-109 ch03 45.449 ch03 49.411
16176_248 SL2.40ch03 12258697 0.0 ch03 45.675 ch03 50.588
4269_289 SL2.40ch03 41329169 0.0 ch03 47.59 ch03 50.936
10885_254 SL2.40ch03 43641801 0.0 ch03 47.947 ch03 50.936
17307_169 SL2.40ch03 45528475 0.0 ch03 47.947 ch03 51.329
8226_324 SL2.40ch03 45545835 0.0 ch03 47.947 ch03 51.329
9894_2134 SL2.40ch03 45590536 0.0 ch03 48.798 ch03 51.706
4304_296 SL2.40ch03 45593276 0.0 ch03 48.873 ch03 51.706
7803_212 SL2.40ch03 45729055 0.0 ch03 49.153 ch03 52.48
5835_289 SL2.40ch03 45884384 0.0 ch03 50.069 ch03 52.48
6012_811 SL2.40ch03 45955491 0.0 ch03 50.654 ch03 52.48
5323_328 SL2.40ch03 46014438 0.0 ch03 50.977 ch03 52.894
3046_230 SL2.40ch03 46175749 0.0 ch03 51.269 ch03 55.523
2609_172 SL2.40ch03 48304989 1e-135 ch03 65.321 ch03 69.251
8937_268 SL2.40ch03 48392836 0.0 ch03 65.613 ch03 70.714
1631_174 SL2.40ch03 51961447 0.0 ch03 71.721 ch03 76.02
2990_121 SL2.40ch03 52147720 0.0 ch03 71.617 ch03 76.775
12773_240 SL2.40ch03 55709932 0.0 ch03 95.606 ch03 81.268
14562_320 SL2.40ch03 55671734 0.0 ch03 84.062 ch03 87.83
6279_201 SL2.40ch03 55699493 0.0 ch03 84.062 ch03 87.864
10536_213 SL2.40ch03 55730561 1e-140 ch03 84.062 ch03 87.864
20035_203 SL2.40ch03 55765967 0.0 ch03 84.062 ch03 87.864
15516_1345 SL2.40ch03 55805628 0.0 ch03 84.062 ch03 87.864
2902_1599 SL2.40ch03 55881481 0.0 ch03 84.062 ch03 87.864
1772_857 SL2.40ch03 55891746 0.0 ch03 84.062 ch03 87.864
438_254 SL2.40ch03 55909638 0.0 ch03 84.062 ch03 87.864
11083_1691 SL2.40ch03 55993522 0.0 ch03 84.062 ch03 87.864
2271_319 SL2.40ch03 56204760 0.0 ch03 84.062 ch03 87.864
5884_353 SL2.40ch03 56273431 0.0 ch03 84.062 ch03 87.864
14383_543 SL2.40ch03 56354826 1e-155 ch03 83.729 ch03 87.864
43_1626 SL2.40ch03 56396878 0.0 ch03 83.695 ch03 87.864
5273_1335 SL2.40ch03 56427199 0.0 ch03 83.695 ch03 87.864
11669_803 SL2.40ch03 56492051 0.0 ch03 83.729 ch03 87.864
5284_315 SL2.40ch03 6635873 0.0 ch03 84.062 ch03 88.049
1852_558 SL2.40ch03 6640355 0.0 ch03 84.422 ch03 88.049
3335_225 SL2.40ch03 6670649 1e-171 ch03 84.422 ch03 88.049
1510_351 SL2.40ch03 55653778 1e-144 ch03 84.062 ch03 88.049
6109_1511 SL2.40ch03 54113014 0.0 ch03 89.36
6435_943 SL2.40ch03 54112490 0.0 ch03 89.431
5205_1290 SL2.40ch03 57593144 0.0 ch03 93.703
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 2577


MarkerDB | Solanum lycopersicum