Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch02

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 2300


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
2302_384 SL2.40ch02 15573284 0.0 ch02 22.933 ch02 0.748
4330_88 SL2.40ch02 13908490 0.0 ch02 22.933 ch02 0.75
5640_191 SL2.40ch02 6285118 0.0 ch02 22.933 ch02 0.757
9102_506 SL2.40ch02 9174361 4e-93 ch02 22.933 ch02 0.757
13353_1553 SL2.40ch02 12015213 0.0 ch02 22.933 ch02 0.757
5667_238 SL2.40ch02 12016517 0.0 ch02 22.933 ch02 0.757
7105_1701 SL2.40ch02 13946039 0.0 ch02 22.933 ch02 0.757
15284_896 SL2.40ch02 14016454 0.0 ch02 22.933 ch02 0.757
11587_1103 SL2.40ch02 14269589 0.0 ch02 22.933 ch02 0.757
7987_144 SL2.40ch02 15396016 1e-124 ch02 22.933 ch02 0.757
14174_72 SL2.40ch02 15632050 0.0 ch02 22.933 ch02 0.757
4472_451 SL2.40ch02 17479093 0.0 ch02 22.933 ch02 0.757
15788_130 SL2.40ch02 17755312 0.0 ch02 22.933 ch02 0.757
2381_201 SL2.40ch02 24167235 0.0 ch02 22.933 ch02 0.757
6392_793 SL2.40ch02 19965466 0.0 ch02 24.716 ch02 1.136
2698_232 SL2.40ch02 21546415 0.0 ch02 26.08 ch02 1.531
9328_525 SL2.40ch02 21680717 1e-164 ch02 26.08 ch02 1.531
16776_152 SL2.40ch02 21696563 1e-124 ch02 26.08 ch02 1.531
14927_182 SL2.40ch02 27927463 0.0 ch02 28.627 ch02 1.919
6900_484 SL2.40ch02 28106260 0.0 ch02 29.089 ch02 2.707
9406_220 SL2.40ch02 28259382 1e-129 ch02 32.112 ch02 3.51
6710_452 SL2.40ch02 28519917 0.0 ch02 33.605 ch02 3.915
106_1150 SL2.40ch02 28653908 0.0 ch02 34.091 ch02 5.156
4228_568 SL2.40ch02 28853903 0.0 ch02 5.918
11019_217 SL2.40ch02 28967832 1e-116 ch02 35.692 ch02 6.759
5136_976 SL2.40ch02 28966880 0.0 ch02 35.692 ch02 7.058
6562_1207 SL2.40ch02 29158971 0.0 ch02 36.676 ch02 8.519
9234_127 SL2.40ch02 29446002 0.0 ch02 39.433 ch02 8.805
5978_473 SL2.40ch02 29644878 0.0 ch02 42.17 ch02 11.555
347_1013 SL2.40ch02 29697611 0.0 ch02 42.17 ch02 11.555
16423_594 SL2.40ch02 32017917 0.0 ch02 25.023
2906_1434 SL2.40ch02 32999961 0.0 ch02 56.077 ch02 32.046
7885_96 SL2.40ch02 33538214 1e-159 ch02 40.494
9189_326 SL2.40ch02 33714430 0.0 ch02 41.867
154_241 SL2.40ch02 33918416 0.0 ch02 43.608
13317_861 SL2.40ch02 34284728 0.0 ch02 46.11
1755_382 SL2.40ch02 34389389 0.0 ch02 46.11
7899_590 SL2.40ch02 34507675 0.0 ch02 46.932
6083_286 SL2.40ch02 34589181 0.0 ch02 47.343
6519_698 SL2.40ch02 34704158 0.0 ch02 48.03
5625_844 SL2.40ch02 34799353 0.0 ch02 48.62
6484_455 SL2.40ch02 34800188 0.0 ch02 48.62
1106_288 SL2.40ch02 34870243 1e-179 ch02 49.023
11793_227 SL2.40ch02 34978222 0.0 ch02 49.772
4385_470 SL2.40ch02 35058032 0.0 ch02 50.114
12959_651 SL2.40ch02 35058367 1e-154 ch02 50.114
141_90 SL2.40ch02 35097601 0.0 ch02 50.114
10197_766 SL2.40ch02 38062223 0.0 ch02 61.241
9673_646 SL2.40ch02 38822919 0.0 ch02 96.004 ch02 65.234
5877_3380 SL2.40ch02 38837604 0.0 ch02 96.004 ch02 65.234
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 2300


MarkerDB | Solanum lycopersicum