Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch01

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 3155


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)		 Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
2758_112 SL2.40ch01 322879 1e-153 ch01 0.691 ch01 0.0
10779_574 SL2.40ch01 1518533 0.0 ch01 17.794 ch01 3.928
7580_248 SL2.40ch01 1558786 0.0 ch01 18.306 ch01 4.3
7553_763 SL2.40ch01 1599533 0.0 ch01 18.808 ch01 5.046
2917_1793 SL2.40ch01 1604128 0.0 ch01 18.808 ch01 5.046
11051_1291 SL2.40ch01 1691253 1e-175 ch01 19.805 ch01 5.792
3775_571 SL2.40ch01 1717395 0.0 ch01 20.378 ch01 5.792
2024_303 SL2.40ch01 1800949 0.0 ch01 21.37 ch01 6.539
21382_304 SL2.40ch01 1821156 0.0 ch01 21.37 ch01 6.539
8475_1014 SL2.40ch01 2218535 0.0 ch01 26.339 ch01 13.268
4350_192 SL2.40ch01 2232675 0.0 ch01 26.813 ch01 13.268
16888_157 SL2.40ch01 2311366 0.0 ch01 27.847 ch01 14.015
4607_633 SL2.40ch01 2342711 0.0 ch01 27.847 ch01 14.015
8181_419 SL2.40ch01 2391535 0.0 ch01 27.847 ch01 14.015
6454_627 SL2.40ch01 2446261 0.0 ch01 27.847 ch01 14.386
4681_78 SL2.40ch01 2476036 0.0 ch01 27.847 ch01 14.758
876_147 SL2.40ch01 2477936 0.0 ch01 27.847 ch01 14.758
4927_1481 SL2.40ch01 2656994 0.0 ch01 29.179 ch01 17.812
12695_655 SL2.40ch01 2687540 1e-144 ch01 29.633 ch01 18.184
6053_184 SL2.40ch01 2714462 0.0 ch01 30.099 ch01 20.071
9322_2031 SL2.40ch01 18235880 0.0 ch01 39.77
273_877 SL2.40ch01 72901373 0.0 ch01 79.251 ch01 71.326
2837_574 SL2.40ch01 72973060 0.0 ch01 80.232 ch01 71.326
3408_760 SL2.40ch01 73275844 0.0 ch01 83.319 ch01 71.326
8284_110 SL2.40ch01 76141991 0.0 ch01 87.372
3468_63 SL2.40ch01 77542432 0.0 ch01 112.494 ch01 91.759
14690_183 SL2.40ch01 77623309 0.0 ch01 113.425 ch01 91.759
13701_368 SL2.40ch01 77678962 0.0 ch01 113.928 ch01 91.759
10443_517 SL2.40ch01 77679462 1e-179 ch01 113.928 ch01 91.759
1214_346 SL2.40ch01 77708496 0.0 ch01 114.386 ch01 92.13
8613_362 SL2.40ch01 77835126 0.0 ch01 114.699 ch01 92.877
17551_338 SL2.40ch01 77899838 0.0 ch01 115.371 ch01 93.623
7243_273 SL2.40ch01 77946777 0.0 ch01 115.371 ch01 94.369
3812_291 SL2.40ch01 77947201 0.0 ch01 115.371 ch01 94.369
17882_537 SL2.40ch01 77980018 0.0 ch01 115.371 ch01 94.369
2854_345 SL2.40ch01 78088219 0.0 ch01 116.739 ch01 95.493
3185_128 SL2.40ch01 78114017 0.0 ch01 117.129 ch01 95.493
3680_782 SL2.40ch01 78136592 0.0 ch01 117.594 ch01 96.239
3554_3617 SL2.40ch01 78156583 0.0 ch01 117.594 ch01 96.611
3703_1260 SL2.40ch01 78215285 0.0 ch01 119.431 ch01 96.983
5925_118 SL2.40ch01 78283228 0.0 ch01 120.0 ch01 96.983
755_348 SL2.40ch01 78287063 0.0 ch01 119.869 ch01 96.983
4061_226 SL2.40ch01 78324728 0.0 ch01 120.365 ch01 96.983
13475_181 SL2.40ch01 78334600 0.0 ch01 120.365 ch01 96.983
9951_655 SL2.40ch01 78363225 0.0 ch01 120.817 ch01 96.983
512_1159 SL2.40ch01 78392598 0.0 ch01 120.817 ch01 96.983
8079_327 SL2.40ch01 78523505 0.0 ch01 122.217 ch01 97.354
5170_119 SL2.40ch01 78525433 0.0 ch01 122.217 ch01 97.354
3170_112 SL2.40ch01 78632658 0.0 ch01 124.111 ch01 97.726
10586_920 SL2.40ch01 78734629 0.0 ch01 124.111 ch01 98.098
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 3155

MarkerDB | Solanum lycopersicum