Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch01

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 3155


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
TES1019 SL2.40ch01 349938 0.0 ch01 0.0 ch01 1.355
CT233 SL2.40ch01 303491 0.0 ch01 1.705
tma0313 SL2.40ch01 257898 0.0 ch01 2.934
TES1974 SL2.40ch01 784008 0.0 ch01 9.111
TGS2126 SL2.40ch01 882904 0.0 ch01 11.368
TES0856 SL2.40ch01 776048 0.0 ch01 12.244
TES0566 SL2.40ch01 1023038 0.0 ch01 13.55
CT197 SL2.40ch01 1035020 0.0 ch01 13.993
TES1991 SL2.40ch01 1035020 0.0 ch01 14.719
TES1802 SL2.40ch01 1334971 0.0 ch01 20.232
TES1971 SL2.40ch01 2463099 1e-171 ch01 21.826
tme0059 SL2.40ch01 1223780 0.0 ch01 22.585
TES1738 SL2.40ch01 1606259 1e-150 ch01 22.973 ch01 18.808
TGS2711 SL2.40ch01 3624890 0.0 ch01 23.164
TES0915 SL2.40ch01 1779685 1e-103 ch01 23.389
cLEC-4-E12 SL2.40ch01 3173430 0.0 ch01 23.592
T1650 SL2.40ch01 2657686 1e-162 ch01 23.612
TEI0013 SL2.40ch01 2247801 0.0 ch01 23.645
cTOB8A5 SL2.40ch01 1469401 1e-178 ch01 23.677
cLET-4-N7 SL2.40ch01 2483296 1e-119 ch01 23.677
TGS0377 SL2.40ch01 2527336 0.0 ch01 23.704 ch01 27.511
TES0233 SL2.40ch01 2120556 0.0 ch01 24.101 ch01 24.879
TES0943 SL2.40ch01 1800965 0.0 ch01 24.131 ch01 20.035
TES0327 SL2.40ch01 3320375 0.0 ch01 24.131
TGS0209 SL2.40ch01 3353525 0.0 ch01 24.53
TGS3442 SL2.40ch01 2364993 0.0 ch01 24.883
TGS3441 SL2.40ch01 3819610 0.0 ch01 25.401
CD15 SL2.40ch01 4595698 2e-41 ch01 25.933
TGS1270 SL2.40ch01 4614503 0.0 ch01 26.167
TES0976 SL2.40ch01 4983955 0.0 ch01 26.876
TES0277 SL2.40ch01 4157591 0.0 ch01 27.365
TGS2972 SL2.40ch01 46593549 0.0 ch01 28.994
TGS2028 SL2.40ch01 23393771 0.0 ch01 29.477
TES0020 SL2.40ch01 5646205 0.0 ch01 29.966
TGS0239 SL2.40ch01 16938306 0.0 ch01 30.687
tmc0046 SL2.40ch01 49861834 1e-103 ch01 31.37
TES0939 SL2.40ch01 40909978 0.0 ch01 31.588
TES0309 SL2.40ch01 13834610 0.0 ch01 31.833
TGS2047 SL2.40ch01 28012888 0.0 ch01 32.178
TGS0349 SL2.40ch01 17696503 0.0 ch01 32.35
tma0210 SL2.40ch01 22877493 0.0 ch01 32.573
TGS1152 SL2.40ch01 48158469 0.0 ch01 32.718
TGS0471 SL2.40ch01 52108057 0.0 ch01 33.108
TGS1164 SL2.40ch01 26060117 0.0 ch01 33.422
TGS0419 SL2.40ch01 11298887 0.0 ch01 33.55
tma0096 SL2.40ch01 21876911 0.0 ch01 33.822
TES0932 SL2.40ch01 33508941 1e-122 ch01 33.978
tma0171 SL2.40ch01 35870864 0.0 ch01 34.385
TGS2812 SL2.40ch01 16554867 0.0 ch01 34.502
CT62 SL2.40ch01 65384898 1e-127 ch01 34.614
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 3155


MarkerDB | Solanum lycopersicum