Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch01

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 3155


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
TES3743 SL2.40ch01 1350154 0.0
TGS1071 SL2.40ch01 1351943 0.0
TES0247 SL2.40ch01 1359862 0.0
TGS4169 SL2.40ch01 1367358 0.0
TGS0976 SL2.40ch01 1367522 0.0
4034_1273 SL2.40ch01 1371355 1e-169
TES0245 SL2.40ch01 1371355 1e-144
TES5082 SL2.40ch01 1377092 0.0
TGS10121 SL2.40ch01 1413415 0.0
TGS0217 SL2.40ch01 1422444 0.0
TES5622 SL2.40ch01 1470406 0.0
TGS10196 SL2.40ch01 1502669 0.0
TES1263 SL2.40ch01 1508011 1e-143
TES4602 SL2.40ch01 1511701 1e-136
TES5305 SL2.40ch01 1518117 0.0
TES4264 SL2.40ch01 1518497 0.0
10779_504 SL2.40ch01 1518533 0.0
10779_574 SL2.40ch01 1518533 0.0 ch01 17.794 ch01 3.928
TGS1422 SL2.40ch01 1520628 0.0
TGS5876 SL2.40ch01 1552140 0.0
TGS3783 SL2.40ch01 1552637 0.0
TGS9907 SL2.40ch01 1554517 0.0
TES3132 SL2.40ch01 1555536 0.0
4745_428 SL2.40ch01 1555536 1e-179
4745_445 SL2.40ch01 1555536 1e-179
4745_652 SL2.40ch01 1555536 1e-179
7580_248 SL2.40ch01 1558786 0.0 ch01 18.306 ch01 4.3
7580_400 SL2.40ch01 1558786 0.0
TES6207 SL2.40ch01 1571372 0.0
4271_894 SL2.40ch01 1578152 0.0
4271_961 SL2.40ch01 1578152 0.0
4271_1093 SL2.40ch01 1578152 0.0
4271_1258 SL2.40ch01 1578152 0.0
4271_1273 SL2.40ch01 1578152 0.0
4271_156 SL2.40ch01 1578152 0.0
4271_292 SL2.40ch01 1578152 0.0
TGS5229 SL2.40ch01 1583901 0.0
TES3087 SL2.40ch01 1584751 0.0
7553_763 SL2.40ch01 1599533 0.0 ch01 18.808 ch01 5.046
2917_1793 SL2.40ch01 1604128 0.0 ch01 18.808 ch01 5.046
2917_1861 SL2.40ch01 1604128 0.0
2917_2027 SL2.40ch01 1604128 0.0
2917_249 SL2.40ch01 1604128 0.0
2917_2766 SL2.40ch01 1604128 0.0
TES5256 SL2.40ch01 1657795 0.0
TES0844 SL2.40ch01 1658700 0.0
TGS9673 SL2.40ch01 1659320 0.0
TES1436 SL2.40ch01 1663709 0.0
TES4330 SL2.40ch01 1677070 0.0
11051_1291 SL2.40ch01 1691253 1e-175 ch01 19.805 ch01 5.792
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 3155


MarkerDB | Solanum lycopersicum