Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch01

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 3155


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
TGS8368 SL2.40ch01 2481831 0.0
cLET-4-N7 SL2.40ch01 2483296 1e-119 ch01 23.677
TES0303 SL2.40ch01 2487679 0.0 ch01 32.014
TGS0377 SL2.40ch01 2527336 0.0 ch01 23.704 ch01 27.511
6761_651 SL2.40ch01 2542709 0.0
19372_508 SL2.40ch01 2554306 0.0
TGS7536 SL2.40ch01 2555055 0.0
TGS12895 SL2.40ch01 2584847 0.0
TES4081 SL2.40ch01 2647067 0.0
4927_1481 SL2.40ch01 2656994 0.0 ch01 29.179 ch01 17.812
T1650 SL2.40ch01 2657686 1e-162 ch01 23.612
TES3976 SL2.40ch01 2657984 1e-172
TES5595 SL2.40ch01 2684970 0.0
12695_655 SL2.40ch01 2687540 1e-144 ch01 29.633 ch01 18.184
TGS5764 SL2.40ch01 2709562 0.0
6053_184 SL2.40ch01 2714462 0.0 ch01 30.099 ch01 20.071
6053_238 SL2.40ch01 2714462 0.0
6053_467 SL2.40ch01 2714462 0.0
6053_499 SL2.40ch01 2714462 0.0
TGS1389 SL2.40ch01 2722747 0.0
TES6735 SL2.40ch01 2751470 0.0
TES1172 SL2.40ch01 2774729 1e-102
TGS12148 SL2.40ch01 2805015 0.0
TES1491 SL2.40ch01 2826519 0.0
TES5771 SL2.40ch01 2837626 0.0
TES6284 SL2.40ch01 2866312 1e-133
TGS4550 SL2.40ch01 2868075 0.0
TGS4947 SL2.40ch01 2910317 0.0
TES7543 SL2.40ch01 2917720 0.0
TES7174 SL2.40ch01 2922621 0.0
TGS10177 SL2.40ch01 2936575 0.0
TES6246 SL2.40ch01 2941598 0.0
TGS3405 SL2.40ch01 2954834 0.0
577_263 SL2.40ch01 2960750 0.0
577_307 SL2.40ch01 2960750 0.0
TGS13068 SL2.40ch01 2963039 0.0
TES0638 SL2.40ch01 2989124 1e-178
TGS13196 SL2.40ch01 2989303 0.0
TES6876 SL2.40ch01 2989985 0.0
TGS4864 SL2.40ch01 3001517 0.0
TES6526 SL2.40ch01 3022374 0.0
TGS10178 SL2.40ch01 3022677 0.0
TGS1280 SL2.40ch01 3024266 0.0
TES4479 SL2.40ch01 3026770 2e-82
TGS10232 SL2.40ch01 3036639 0.0
TES0893 SL2.40ch01 3108573 0.0
TES7460 SL2.40ch01 3141630 1e-136
TGS10297 SL2.40ch01 3153777 0.0
cLEC-4-E12 SL2.40ch01 3173430 0.0 ch01 23.592
TGS9281 SL2.40ch01 3187198 0.0
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 3155


MarkerDB | Solanum lycopersicum