Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch01

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 3155


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
4271_1258 SL2.40ch01 1578152 0.0
4271_1273 SL2.40ch01 1578152 0.0
4271_156 SL2.40ch01 1578152 0.0
4271_292 SL2.40ch01 1578152 0.0
TGS5229 SL2.40ch01 1583901 0.0
TES3087 SL2.40ch01 1584751 0.0
7553_763 SL2.40ch01 1599533 0.0 ch01 18.808 ch01 5.046
2917_1793 SL2.40ch01 1604128 0.0 ch01 18.808 ch01 5.046
2917_1861 SL2.40ch01 1604128 0.0
2917_2027 SL2.40ch01 1604128 0.0
2917_249 SL2.40ch01 1604128 0.0
2917_2766 SL2.40ch01 1604128 0.0
TES1738 SL2.40ch01 1606259 1e-150 ch01 22.973 ch01 18.808
TES5256 SL2.40ch01 1657795 0.0
TES0844 SL2.40ch01 1658700 0.0
TGS9673 SL2.40ch01 1659320 0.0
TES1436 SL2.40ch01 1663709 0.0
TES4330 SL2.40ch01 1677070 0.0
11051_1291 SL2.40ch01 1691253 1e-175 ch01 19.805 ch01 5.792
17862_165 SL2.40ch01 1703230 1e-170
17862_207 SL2.40ch01 1703230 1e-170
17862_306 SL2.40ch01 1703230 1e-170
3775_571 SL2.40ch01 1717395 0.0 ch01 20.378 ch01 5.792
TGS4559 SL2.40ch01 1775152 0.0
TES2738 SL2.40ch01 1775937 1e-140
TES0915 SL2.40ch01 1779685 1e-103 ch01 23.389
TES4693 SL2.40ch01 1781898 0.0
TGS5537 SL2.40ch01 1800169 0.0
2024_303 SL2.40ch01 1800949 0.0 ch01 21.37 ch01 6.539
2024_429 SL2.40ch01 1800949 0.0
TES0943 SL2.40ch01 1800965 0.0 ch01 24.131 ch01 20.035
TGS9672 SL2.40ch01 1803986 0.0
TES0724 SL2.40ch01 1806527 0.0
TES2782 SL2.40ch01 1808251 0.0
TES3428 SL2.40ch01 1809509 0.0
TGS8828 SL2.40ch01 1815258 0.0
21382_304 SL2.40ch01 1821156 0.0 ch01 21.37 ch01 6.539
TES0138 SL2.40ch01 1824110 0.0
TES4724 SL2.40ch01 1842333 0.0
TGS13238 SL2.40ch01 1846898 0.0
TGS8763 SL2.40ch01 1860790 0.0
TES3851 SL2.40ch01 1871620 0.0
TES3862 SL2.40ch01 1875495 0.0
TGS8747 SL2.40ch01 1877969 0.0
TES4301 SL2.40ch01 1878202 0.0
TES5182 SL2.40ch01 1882750 0.0
TES3076 SL2.40ch01 1883310 0.0
16523_683 SL2.40ch01 1899541 0.0
TES1947 SL2.40ch01 1904383 0.0
TES5111 SL2.40ch01 1927159 0.0
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 3155


MarkerDB | Solanum lycopersicum