Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch01

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 3155


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
1581_811 SL2.40ch01 1123278 0.0
9185_967 SL2.40ch01 1129362 0.0
12995_749 SL2.40ch01 1139451 0.0
TES6136 SL2.40ch01 1139482 0.0
TGS0604 SL2.40ch01 1175038 0.0 ch01 11.625
TGS4215 SL2.40ch01 1175115 0.0
3850_896 SL2.40ch01 1183435 0.0 ch01 13.259
tme0059 SL2.40ch01 1223780 0.0 ch01 22.585
TGS9429 SL2.40ch01 1264104 0.0
TES6172 SL2.40ch01 1264553 0.0
TES4363 SL2.40ch01 1270637 1e-155
17194_312 SL2.40ch01 1270768 0.0
17194_455 SL2.40ch01 1270768 0.0
TGS2800 SL2.40ch01 1326519 7e-99
TES5283 SL2.40ch01 1332576 0.0
TES1802 SL2.40ch01 1334971 0.0 ch01 20.232
TES1797 SL2.40ch01 1334994 0.0
TES3743 SL2.40ch01 1350154 0.0
TGS1071 SL2.40ch01 1351943 0.0
TES0247 SL2.40ch01 1359862 0.0
TGS4169 SL2.40ch01 1367358 0.0
TGS0976 SL2.40ch01 1367522 0.0
4034_1273 SL2.40ch01 1371355 1e-169
TES0245 SL2.40ch01 1371355 1e-144
TES5082 SL2.40ch01 1377092 0.0
TGS10121 SL2.40ch01 1413415 0.0
TGS0217 SL2.40ch01 1422444 0.0
cTOB8A5 SL2.40ch01 1469401 1e-178 ch01 23.677
TES5622 SL2.40ch01 1470406 0.0
TGS10196 SL2.40ch01 1502669 0.0
TES1263 SL2.40ch01 1508011 1e-143
TES4602 SL2.40ch01 1511701 1e-136
TES5305 SL2.40ch01 1518117 0.0
TES4264 SL2.40ch01 1518497 0.0
10779_504 SL2.40ch01 1518533 0.0
10779_574 SL2.40ch01 1518533 0.0 ch01 17.794 ch01 3.928
TGS1422 SL2.40ch01 1520628 0.0
TGS5876 SL2.40ch01 1552140 0.0
TGS3783 SL2.40ch01 1552637 0.0
TGS9907 SL2.40ch01 1554517 0.0
TES3132 SL2.40ch01 1555536 0.0
4745_428 SL2.40ch01 1555536 1e-179
4745_445 SL2.40ch01 1555536 1e-179
4745_652 SL2.40ch01 1555536 1e-179
7580_248 SL2.40ch01 1558786 0.0 ch01 18.306 ch01 4.3
7580_400 SL2.40ch01 1558786 0.0
TES6207 SL2.40ch01 1571372 0.0
4271_894 SL2.40ch01 1578152 0.0
4271_961 SL2.40ch01 1578152 0.0
4271_1093 SL2.40ch01 1578152 0.0
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 3155


MarkerDB | Solanum lycopersicum