Red clover Marker Database

RCS6330 Information

Marker name RCS6330
Marker category Red_clover_SSR
Primer sequences Fw ACTCTGCAAATCCACTCGCT
Rv ACCGTAACCGTCATCGGTAG
EST/Genome sequences BB917925
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG2
Position 81.609
SNP Position
Method
SSR Fragment size 149
Pattern* AGC
Repeat count 14
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS6330
Enzyme
Related markers Marker name AP004513, mth2-36n3
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense