Red clover Marker Database

RCS5799 Information

Marker name RCS5799
Marker category Red_clover_SSR
Primer sequences Fw CAAACAATTAGGGCGTGTGA
Rv TCGATCCGTTCAGCTATTCC
EST/Genome sequences DE240096
Lines
PIC Value 0.771145
Lines 48
Map
(HR x R130)
Linkage LG1
Position 41.678
SNP Position
Method
SSR Fragment size 289
Pattern* AAG
Repeat count 73
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5799
Enzyme
Related markers Marker name mth2-34l12
Species Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense