Red clover Marker Database

RCS5604 Information

Marker name RCS5604
Marker category Red_clover_SSR
Primer sequences Fw CCGACCTCCACCTGATTAGA
Rv GGTGATGGTGGAGCTTTGAT
EST/Genome sequences DE238837
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG6
Position 41.06
SNP Position
Method
SSR Fragment size 300
Pattern* GGT
Repeat count 13
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5604
Enzyme
Related markers Marker name AP007839, mth2-26c3
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense